Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3652 |
Symbol | rplF |
ID | 6411328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3908921 |
End bp | 3909454 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642713532 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_001992627 |
Protein GI | 192292022 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACGCG TTGGCAAGAA GCCCGTCACG GTCCCGTCTG GGGTGACGGC GACCGTCGAG GGACAGACCG TCAAGATGAA GGGGCCGAAG GGCCAGCTTC AGTTCGTCGT GCACGACGAC GTCGACGTGA AGTTCGAGGA CGGTGCGGTC AAGGTGGCGC CGCGGCACGA GACCAATCGT GCCCGTGCGC TGTACGGGAC GGCTCGCGCT CAGATCGCGA ATCTGGTGGA AGGCGTCACC AAGGGCTTCG AGAAGAAGCT CGAGATCACC GGCGTCGGCT ATCGCGCGGC GATGCAGGGC AAGAAGCTGC AGCTCGCGCT CGGCTACAGC CACGACGTGC TGTACGACAT CCCGGAAGGC ATCACCATCA CGGTGCCGAA GCCGACCGAG ATCAATGTCG TCGGCATCGA CCCTCAGAAG GTCGGCCAGG TCGCCGCTGA GATCCGCGAC TACCGTCCGC CGGAGCCGTA TAAGGGTAAG GGCGTGCGTT ACGCCGACGA ATTCATCTTC CGCAAGGAAG GCAAGAAGAA GTAA
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Protein sequence | MSRVGKKPVT VPSGVTATVE GQTVKMKGPK GQLQFVVHDD VDVKFEDGAV KVAPRHETNR ARALYGTARA QIANLVEGVT KGFEKKLEIT GVGYRAAMQG KKLQLALGYS HDVLYDIPEG ITITVPKPTE INVVGIDPQK VGQVAAEIRD YRPPEPYKGK GVRYADEFIF RKEGKKK
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