| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3647 |
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| Symbol | secY |
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| ID | 6411323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3905676 |
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| End bp | 3907007 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642713527 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001992622 |
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| Protein GI | 192292017 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTCAG CAGCTGAACA ACTAGCGGCA AACCTCAACT TTTCGGCGCT TGGTAAAGCC
GAAGAGCTGA AGAAGCGGAT CTGGTTCACG CTCGGCGCCC TGCTGGTGTA CCGCTTCGGC
ACCTACATCC CGCTGCCGGG CATCGACCCG AACGTGTGGG AGCAGGTGTT CCGCCAGCAG
GCCGGCGGCA TCCTCGGCAT GTTCAATATG TTCGCCGGCG GCGGCATTCA CCGCATGGCG
ATCTTCGCGC TCAACATCAT GCCGTACATC TCGGCATCGA TCATCGTGCA GCTGCTGACC
ACCGTGTCGC CGCAGCTCGA AGCGCTGAAG AAGGAAGGCG AGAGCGGCCG CAAGACGCTC
AATCAATACA CCCGCTACCT CACCGTGATC CTGGCGCTGT TCCAGTCCTA CGGCATCGCC
GTCGGCCTCG AAGGCGCGGG CAATGTGGTG TCCGACCCGG GGATGTTCTT CCGGCTGTCG
ACCACGATCA CGCTGACCGG CGGCACCATG TTCCTGATGT GGCTGGGTGA GCAAATCACC
TCGCGCGGCA TCGGCAACGG CATTTCGCTG ATCATCCTCG CCGGCATCGT CGCCGAGCTG
CCGTCTGCTC TGGCGAATAT GCTCGAGCTC GGCCGTCAGG GCGCGCTGTC GACCGGCCTG
ATCCTGGTCG TGCTGGTGAT GGCCGTCGTC GTGATCGCCT TCATCGTGTT CATGGAGCGC
GCCCAGCGCC GTCTCCTGAT CCAGTATCCG AAGCGCCAAG TCGGCAATAA GATGTTCGAG
GGCCAGTCCT CGCATCTGCC GCTGAAGCTG AACACTGCGG GCGTGATCCC GCCGATCTTC
GCGTCGTCGC TGCTGCTGCT GCCGACCACG ATCGCGAACT TCAACGCCGG CAGCGGTCCG
GAGTGGTTCC AGTGGATCGT GACCCAGTTC GGTCACGGCC GGCCGCTGTT CCTGCTGTTC
TACATCGGCA TGATCGTGTT CTTCGCGTTC TTCTACACCG CGATCGTGTT CAACCCGACC
GAGACCGCGG ACAATCTGAA GAAGCACGGC GGCTTCATTC CGGGTATCCG GCCGGGTGAG
CGCACCGCCG AGTACATCGA TTACGTGCTG TCGCGCATCA CCGTGGTCGG TGCGATCTAC
CTGGCGATCG TCTGCTTGAT CCCGGAGATC ATGATTTCCT ACGCCTCGGT CCCGTTCTAT
TTCGGCGGAA CTTCGCTTCT GATCGTCGTC AGCGTGACGA TGGATACGGT GGCGCAGGTG
CAGGGCTATC TGCTGGCTCA CCAGTATGAA GGCCTGATCA AGAAGTCGAA GTTGCGGGGG
CGCAAGAAAT GA
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| Protein sequence | MVSAAEQLAA NLNFSALGKA EELKKRIWFT LGALLVYRFG TYIPLPGIDP NVWEQVFRQQ
AGGILGMFNM FAGGGIHRMA IFALNIMPYI SASIIVQLLT TVSPQLEALK KEGESGRKTL
NQYTRYLTVI LALFQSYGIA VGLEGAGNVV SDPGMFFRLS TTITLTGGTM FLMWLGEQIT
SRGIGNGISL IILAGIVAEL PSALANMLEL GRQGALSTGL ILVVLVMAVV VIAFIVFMER
AQRRLLIQYP KRQVGNKMFE GQSSHLPLKL NTAGVIPPIF ASSLLLLPTT IANFNAGSGP
EWFQWIVTQF GHGRPLFLLF YIGMIVFFAF FYTAIVFNPT ETADNLKKHG GFIPGIRPGE
RTAEYIDYVL SRITVVGAIY LAIVCLIPEI MISYASVPFY FGGTSLLIVV SVTMDTVAQV
QGYLLAHQYE GLIKKSKLRG RKK
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