Gene Rpal_3638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3638 
Symbol 
ID6411314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3898950 
End bp3899339 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content69% 
IMG OID642713518 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_001992613 
Protein GI192292008 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.386135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCC GCAATTTTGC CTGCGCGCCG GGCTGCTCGG TCGAGGTGAC GCTCGATCTG 
ATCGACGGCA AGTGGAAGGG CGTCATCCTC TACCATCTGC AGGATGGCCG GCTGCGGTTC
GGCGAGCTGC GCCGGCGGAT GCCGGGCATC ACGCAGCGGA TGCTGACCAA GCAGTTGCGC
GCTCTGGAAG ACGACGACCT GATTACCCGC GAGGTATTCG CCGAGGTGCC GCCGCGGGTG
GAATACGCGC TGTCGGAGAC CGGCGAGCGG CTGCGCCCGG TGATCGACGC CCTCAAGCGC
TGGGGCGAGG AACATCGCGC CCGCCAGCAG CAGCTCGCGC CGCGCGCCGC CGAGCCGCCG
TCCGAAACTG CCGAGGCTCA GCCGGCGTGA
 
Protein sequence
MKRRNFACAP GCSVEVTLDL IDGKWKGVIL YHLQDGRLRF GELRRRMPGI TQRMLTKQLR 
ALEDDDLITR EVFAEVPPRV EYALSETGER LRPVIDALKR WGEEHRARQQ QLAPRAAEPP
SETAEAQPA