Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3632 |
Symbol | |
ID | 6411308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3889656 |
End bp | 3891716 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642713512 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001992607 |
Protein GI | 192292002 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCTC CTTCCAGTCC TGCCGTGAGT CAGAGCGAGG CGCGCTATCG TGCGCTGTTC GAGGCGATCG ACGACGGCTT CTGCATCATC GAATTCTTCG ACGGCCCGCA CGGCCCGCTC AGCGACTATC GCCATATCGA AGCCAACGCC GGCTACGAGA AGCAGACTGG CATTCCCAAC ATCATCGGCC GCACCTTGCG CGATCTCGTG CCCGACGAAG CAGACGGCTG GGCGGAGCTG TATCGCAGCG TGCTGCTGAC CGGCCGGCCG CTTCATTTCG AGCGCGAATT CCTCGCGGTG AATCGCATCA TCGAAGTGTC GGCGACGCGG ATCGAGCCGC CGGAGCTACG CCAGGTATCG GTTCTGTTCC GCGACATCAC CGCGCGCAAA CGTGCCGAAG CGGCGCTGCG CGATAGCGAG CAGCTGGCAC GCGAGAACGT GCAGCGGGTG CAGCTCGCGC TCGCCGCCGG TGCGATCATC GGCACCTGGC TGTGGGATCT GCCGAGCGAC CGCTTCACCG TCGACGAAGC ATTCGCGCGC GCGTTCGGGC TCGATCCGGC GCTCGGCCGC GATGGCCTCA GCCTGGCGCA AATCGTCGCC ACCGTGCATC CCGATGATCG GGCCGGACTC GCCACAGCGA TCGAGGAAGC GATCAAGCGC GGCGGGCCTT ACGCGCATCA GTACCGGGTG CGCCGCGCCG ACGGCAAGTA CTACTGGCTC GAGGCCAACG GGCGCGTCGA GCATGGCCCC GACGGCACGC CGCTCAGCTT CCCCGGCGTG CTGATCGACG TCGACGACCG CCGCGCGCTG GTGGCCGAAC GCGACCGCGC CATCGCCGAG CTGCGCGCGC TGAACGAGAC GCTGGAGCAG CGCGTCGCCG AAGCCCGCGC CGAGCTCTTG CGCTCCGCCG AACAGCTGCG CCAGTCGCAG AAGATGGAAG CGGTCGGCCA GCTCACCGGC GGGCTGGCGC ACGACTTCAA CAATCTGCTC GCCGGCATCT CCGGCAGCCT CGAACTGATG AGTTCGCGGA TCCGCCAGGG CCGGGTCGGC GAGATCGAAA AATACGTGGT GGCGGCGCAA GGCGCGGTGA AGCGTGCGGC ATCGCTGACC CACCGCCTGC TCGCTTTCGC GCGGCGCCAG ACGCTGACGC CGACCGCCGC CAACGTCAAC CGGCTGGTCA GCGGCATGAT CGACCTGATC CAGCGCAGCG TCGGTCCCGG CATCGACGTG CAGCATGTCG GCGCCGCCGG GCTGTGGAGC GTGCTGGTCG ACGTGCCGCA GCTCGAAAGC GCGCTGCTCA ATCTGTGTAT CAACGCCCGC GATGCGATGC CGAACGGCGG CAAGATCACG ATCGAAACCG GCAATCGCTG GATCGACCGG TCGCAGTCGC GGCTGTACGA CATCCCGACC GGGCAATACG TGTCGCTGTG CGTCTCCGAC ACCGGCACCG GCATGACGCC CGACGTGATC GCCAAAGCGT TCGATCCATT CTTCACCACC AAGCCGATTG GCCAGGGCAC CGGGCTCGGG CTGTCGATGA TCTACGGCTT CGCGCAGCAA TCCGGCGGCC AGGTGCGGAT CTATTCCGAG GTCGGCCAGG GCACGATGGT GTGCATCTAT CTGCCGCGGC ACCGCGGCGA GGCCGCCGAG GACGAACGCT TCCCCGACTC CACTGAGATT CCGTTCGCCC ACACCGGCGA GACAGTGATG GTGGTCGACG ACGAGCCCAC GGTGCGGATG CTGGTCGCCG ACGTGCTCGA AGACCTCGGT TACACCGCAC TGGAAGCCTC TGACAGCGTC GGCGGCCTGA AGCTGCTGCA ATCTGACGCC CGGATCGACC TGCTGGTGAC CGACGTCGGC CTGCCCGGCG GCATGAACGG CCGCCAGCTC GCCGACGCCG CCCGCCAGAT CCGCCCCGGG CTCAACGTGC TGTTCATCAC CGGCTTTGCC GAGAACGCAC TGCTCAACAA CGGCCAGCTC GAACCCGGCA TGGCGGTGCT GACCAAACCG TTCGCGGTCG ACACGCTGGC GGCGCGGATC CGCGAGCTGA TCGGGAAGTA G
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Protein sequence | MQPPSSPAVS QSEARYRALF EAIDDGFCII EFFDGPHGPL SDYRHIEANA GYEKQTGIPN IIGRTLRDLV PDEADGWAEL YRSVLLTGRP LHFEREFLAV NRIIEVSATR IEPPELRQVS VLFRDITARK RAEAALRDSE QLARENVQRV QLALAAGAII GTWLWDLPSD RFTVDEAFAR AFGLDPALGR DGLSLAQIVA TVHPDDRAGL ATAIEEAIKR GGPYAHQYRV RRADGKYYWL EANGRVEHGP DGTPLSFPGV LIDVDDRRAL VAERDRAIAE LRALNETLEQ RVAEARAELL RSAEQLRQSQ KMEAVGQLTG GLAHDFNNLL AGISGSLELM SSRIRQGRVG EIEKYVVAAQ GAVKRAASLT HRLLAFARRQ TLTPTAANVN RLVSGMIDLI QRSVGPGIDV QHVGAAGLWS VLVDVPQLES ALLNLCINAR DAMPNGGKIT IETGNRWIDR SQSRLYDIPT GQYVSLCVSD TGTGMTPDVI AKAFDPFFTT KPIGQGTGLG LSMIYGFAQQ SGGQVRIYSE VGQGTMVCIY LPRHRGEAAE DERFPDSTEI PFAHTGETVM VVDDEPTVRM LVADVLEDLG YTALEASDSV GGLKLLQSDA RIDLLVTDVG LPGGMNGRQL ADAARQIRPG LNVLFITGFA ENALLNNGQL EPGMAVLTKP FAVDTLAARI RELIGK
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