| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3627 |
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| Symbol | |
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| ID | 6411303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3883772 |
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| End bp | 3887179 |
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| Gene Length | 3408 bp |
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| Protein Length | 1135 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713507 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001992602 |
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| Protein GI | 192291997 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAGC AGGCCGTCAT CGTCCGCAAG TGCTATGTTG GTTCCAGGCT CACCCGCGGG
CTCGTCGTTG CCGGCGTGAT CGGTCTCGCG ACCTCGCCGG CGCTGGCACT GACCAAGGAA
GCCGCGCTGG AACAATGCCG GATGTCGGTC GGCCGTCCGA TCGTGATGGA GTGCATGCGC
GGCGGCGGCG GCAATCTCGA AGCCTGCCGC GCCCGGGCGA CGCCGCGGGT GCGCGCCTGC
GTGATGGCGA AAATGCAATC CGCGAACGGC CGCGCCAATG TTGCGGTGGC GATCCCCACC
GAAGCTGCGC CCAAGCTTCC GTCCGGCGCC GCGGCCAGCG CCGGCTTCGT CGCGCCGCCG
CGCACCATCG CCGACATCAC CGCCATTCTC GACAGCGAAA AGCCGAACGC GGCCAAGATC
GCCGAGGTCA AAGCTGCGGC CGACGCCGCA CCTACCGGGA AGGAATCCAA GGCGGAGCTG
GCGCAGTTCT ATTTCGACCG CGCCAATGCC CGCGCCCAGC TCGGCCGGCT GGCCGACACG
CTGACCGATG CCGATAAGGC GATCGAGGTC GGTCGCAGCG CGGTCAGCCC TAACTTCATG
GGCCGACTGA TCCAGCTCGC CGCACTGCAA TACGCCGGCG CCGGCGATCC CAAAAAGGCG
CTCGACCTCT ATCTGCGCCA GAACAAGGAG ATCGGCACCC AGGCCGGCTC CAAGGGCTAT
CAATTCGGCG CCAACCGCAG CATCGCGCAA TTCCTGATCC AAATCGGCGA CATCCCGCAG
GCGGAGGCCT ATCTCCGCCG CAACGATGCG CTGATCAAGG AAGCGCGCAC CAGCTTCCTG
CCCGGCTGGC GCAAGTCCTA CGCCGTATTC GGCCAGAGCT GGGAAGCCGA GATCGAGACC
GGCCGCGCCC TGCTGTTCGA GGCTCGCGGC CAGATCCGCG AGGCCGAGAT CGCGTACGGG
CTCGGCGAGC AGCGGCGGCG GGCGGCGATC AAGCCGCTCC TCGGCACGGA AAACCCGCCT
TCCGAGTCGC AGCTGCTGCA GGCGGTCGAT GTCACCATCA TCAGCCAGGC ACGGACCAAG
GCGCGGCAGG GCCGGCTCGC CGAGGCCGAG GCCGACGCAC GACGCGCGCT GCTGTCGCGG
CTGAAGGACA CCGGCAAGTA CAATCCTTCG ACGCCGCGCT ATATCATGGC GCTGGCCGAC
ATCCTGATCG AACAGGGCCG CTACGCCGAG GCCGAGAAGC TGGCGCGCGC CTGCCTCGAG
ATCAACGCCA CCGTCGGCGT CGCCGACGAC GCCGTCACCC ACCTACAGCT GCTGACGCAG
CTCGGCGGCG TACTCAATTT GCAGCGCAAG GGCCGCGAGG CCAATGCGGT GTTCGCGCAG
ATCGACAAGG CGACCGCCAA CTGGGACCCG CAGCGGCGCC GCTCCTTTGA ACTCAATCCG
GCGCGTATCG TCTCACTCTA TGCGTCGGGC CAGATCGACA AGGGCGTCGC TGCCGCCGAA
CAGCTCGTGC AGCGGCAGAT CGCCCGCGTC GGCGAGACGC ATTTCGACAC TGCATCGGCG
CGCGGCACGC TGGCGGTGGG GCTGATGCGC GCCGGCCGCG ACGCCGACGC GACGCGCGAG
TTCAAGGCCG CAATTCCGGT GATGATGGCA GCGTCGCGCG AGGCCACGGA CGATGACGAC
ACCACCGGCA TCGCGGCGCG CAGCCAGCGG CTACAGGGCG TGGTGGAATC CTATTTTCTG
ATGCTGGCAC GCAATGCGTC GGCGCCCAGT GAGGTCGGCG AAGAGACTTT CGGCCTTGCC
GACGCGGTGC GCGGCCGCTC GGTACAGCAG GCGCTCGCCG CCTCCAGCGC GCGCGCCGCT
GCGAAGGACC CGGCACTGGC CGAACTGGTG CGCAAGGAGC AGGACCTATC CAAGCAGGTC
AACGCCCAGC TCGGCACCCT GAACAACGTG CTGTCGCTGC CCTCTTCCGA GCGCGACGAA
AAGGGTGTGC AGGCAATCAA CGCATCGATC AACGCACTGC GCATGGAGCG GAGCAAGGCG
CGCCAGGACA TCAATCAGAA ATTCCCGGCC TATGCCGACC TGGTATCACC GAAGCCGCCA
ACGGTGGCGG AGATCCGCGC GACGCTGGCT GACGACGAGG CGATGCTGTC GTTCTATTTC
GGCCAGAGTG GGAGCTTCGT CTGGGCCGTT CCGAAATCCG GGCCAGTCGC GTTCGCGGCC
ATCAAGGCGA GCAGCGGCGA CATCGAGAGC AAGGTGCGCA AGCTGCGCGA GGCGCTCGAA
CCGCAGGCGG CGATGATCTC GGATATCCCC GAGTTCGACC TAAAACTCAG CTACGAACTC
TACACGCTGC TGCTGCAGCC GGTCGAAAGC GGCTGGAAGC CGGCGAAGAA ACTGATCGTC
GTCACCAACG GCGCGCTGGG CCTGCTGCCG CTGTCGCTGC TGCCGATCGC ACCGGCGGAA
GCCGCGCCCG ACGCCGATCC GCTGTTCACC TCCTACCGCG ACGTGCCGTG GCTGGCGCGC
AGCCACGCGG TGACCACCGT GCCGTCCGCC GCGGCGCTGC GCACGCTGCG GCAATTGCAG
CCCGGCAAAC CCAATCGCGG CGATCTGGTG GCGTTCGGCG ATCCGTATTT CAACACCGAG
CAGGCGGCCG AGGCGGCAAC GGTCAAGGTC GCCGACGCCG CCAGCAATGC AGCAGCGGAG
ACGCTGACGC GCGGCGGCCC ACTGAAGCGG CGCAATAGCC CCAAGCTTGA CGGCGTCGAC
AGCGCCGAGC TCGGCCTTCT GCCGCGGCTG CCCGATACGT CCGACGAACT CAAATCGATC
GCGTTGGCGC TGCAGGCCGA TCCGTCCAAG GTGCTGTTCC TCGGCAAGGA TGCGTCGGAG
AAGACCGTCA AGTCGCTGAA CCTGTCGGGC TTCAAGATCC TGGCCTTCGC CACCCACGGT
CTCGTCCCTG GCGAACTCAA CGGCCTGCAG CAGCCGGCGC TGGCGCTGTC GTCGCCGACA
GTCACCGGCG ACAGCGGCGA CGGGCTGCTG ACCATGGAGG AAATCCTCGG TCTCAAGCTC
GATGCCGACT GGGTCGTGCT GTCGGCCTGC AACACCGGCG CGGGTGCCGG CGCCGGTGCC
GAGGCCGCCT CCGGTCTCGG CCGCGCGTTC TTTTATGCCG GCACGCGGGC CCTGCTCGTC
ACCAACTGGT CGGTGCATTC GCAGTCGGCG CGCGAACTCG TCACCGATCT GTTCAAGCGC
CAAGCCGGCG ACGCCAAGCT GGCGCGAAGC GAAGCGCTGC GCCAGGCGAT GATGGCGCTG
GTCGACGGCC CCGGCCATGT CGGCAGCGAC GGCAAGACCG ATTTCACCTA CGCCCATCCA
TTGTTCTGGG CGCCCTACAC CATCATCGGC GACGGCGGTG TCCGCTGA
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| Protein sequence | MQQQAVIVRK CYVGSRLTRG LVVAGVIGLA TSPALALTKE AALEQCRMSV GRPIVMECMR
GGGGNLEACR ARATPRVRAC VMAKMQSANG RANVAVAIPT EAAPKLPSGA AASAGFVAPP
RTIADITAIL DSEKPNAAKI AEVKAAADAA PTGKESKAEL AQFYFDRANA RAQLGRLADT
LTDADKAIEV GRSAVSPNFM GRLIQLAALQ YAGAGDPKKA LDLYLRQNKE IGTQAGSKGY
QFGANRSIAQ FLIQIGDIPQ AEAYLRRNDA LIKEARTSFL PGWRKSYAVF GQSWEAEIET
GRALLFEARG QIREAEIAYG LGEQRRRAAI KPLLGTENPP SESQLLQAVD VTIISQARTK
ARQGRLAEAE ADARRALLSR LKDTGKYNPS TPRYIMALAD ILIEQGRYAE AEKLARACLE
INATVGVADD AVTHLQLLTQ LGGVLNLQRK GREANAVFAQ IDKATANWDP QRRRSFELNP
ARIVSLYASG QIDKGVAAAE QLVQRQIARV GETHFDTASA RGTLAVGLMR AGRDADATRE
FKAAIPVMMA ASREATDDDD TTGIAARSQR LQGVVESYFL MLARNASAPS EVGEETFGLA
DAVRGRSVQQ ALAASSARAA AKDPALAELV RKEQDLSKQV NAQLGTLNNV LSLPSSERDE
KGVQAINASI NALRMERSKA RQDINQKFPA YADLVSPKPP TVAEIRATLA DDEAMLSFYF
GQSGSFVWAV PKSGPVAFAA IKASSGDIES KVRKLREALE PQAAMISDIP EFDLKLSYEL
YTLLLQPVES GWKPAKKLIV VTNGALGLLP LSLLPIAPAE AAPDADPLFT SYRDVPWLAR
SHAVTTVPSA AALRTLRQLQ PGKPNRGDLV AFGDPYFNTE QAAEAATVKV ADAASNAAAE
TLTRGGPLKR RNSPKLDGVD SAELGLLPRL PDTSDELKSI ALALQADPSK VLFLGKDASE
KTVKSLNLSG FKILAFATHG LVPGELNGLQ QPALALSSPT VTGDSGDGLL TMEEILGLKL
DADWVVLSAC NTGAGAGAGA EAASGLGRAF FYAGTRALLV TNWSVHSQSA RELVTDLFKR
QAGDAKLARS EALRQAMMAL VDGPGHVGSD GKTDFTYAHP LFWAPYTIIG DGGVR
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