Gene Rpal_3626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3626 
Symbol 
ID6411302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3882685 
End bp3883590 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID642713506 
Productdienelactone hydrolase 
Protein accessionYP_001992601 
Protein GI192291996 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGGC AGATGCTGTT AGCTGCCGCC TGGATGCTGG CGCTGGCGCA GCCGGTTACT 
GCGGGAGAGG GGGGCGATGC GCTCGTGCTG CCACGCGACA TCGTGCAGCG CGCGTCGTCG
TTTGCCGACG ACCTGGTGCT GCCCGATCGA GCCGAGTCGA TCGCTGCGCT TAGCGCGCCG
CGCATGGCGC TGCTGAAGCC GCCCGGCGAT GGGCCTTTTC CGGCACTCGT GCTGCTGCAT
CAATGCGCTG GATTGAACGG CGCGGTGGCG GCCTGGGCAA GGCGCGCGGT CGCGCGAAAC
TACGTAGTGC TTCTGCTCGA TGCGTTCGGC GCGCGCGGAG TCAGCAGCGT CTGCTACGGG
CCGCAAGCGG GCGTCAATTT GGTGCGTGGC GCCAAGGACG CGGTGCAGGC TGCGCAGCAT
CTGCGCCGGC AGCCGTTCGT CGATTCCAAA CGCGTTGCGC TGGTCGGGTT TTCCTGGGGC
GGTATGGTCG GCCTGCTGGC GGCACGCCGG CACTATCTCG ACGCGTTCGG CGCCGGCCCG
GGCTTCACCG CGGTCGCCAG CTTCTATCCA GGCTGCTTCC GCATCAAGCC GCCGGGAGGT
CGCGACTACG AACTGCTCGG CCCCGACATC GCTCAACCGC TGCTGTTGCT GATGGGTGGC
GCCGATACCG AGACGCCCGC TGCCGAATGC GTCGAAAAGC TGACGCCGGT CAAGGCCGCC
GGCGCTCCGG TCGAGTGGCA CGTCTATCCC GGAACGACGC ATTGCTGGGA CTGCCAGCAA
CTCGACGGCC GCAGCAAGAT CGACGTCCGG GGCAACCACG TCGCCTACCG CTATCAGCCA
TCGGTGGTCG AGGATTCGGA GCGGCGGCTG TTCGACTTCC TGCAGCGCAG CTTCGCAGGT
AAGTAA
 
Protein sequence
MLRQMLLAAA WMLALAQPVT AGEGGDALVL PRDIVQRASS FADDLVLPDR AESIAALSAP 
RMALLKPPGD GPFPALVLLH QCAGLNGAVA AWARRAVARN YVVLLLDAFG ARGVSSVCYG
PQAGVNLVRG AKDAVQAAQH LRRQPFVDSK RVALVGFSWG GMVGLLAARR HYLDAFGAGP
GFTAVASFYP GCFRIKPPGG RDYELLGPDI AQPLLLLMGG ADTETPAAEC VEKLTPVKAA
GAPVEWHVYP GTTHCWDCQQ LDGRSKIDVR GNHVAYRYQP SVVEDSERRL FDFLQRSFAG
K