| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3608 |
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| Symbol | |
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| ID | 6411284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3863206 |
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| End bp | 3866691 |
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| Gene Length | 3486 bp |
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| Protein Length | 1161 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713488 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_001992583 |
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| Protein GI | 192291978 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.408451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAATCG ACCAGGGACC GATCAGTCTC GATCAGAAAT ACACGCAGCA CTCAGGACAC
GTCTTCCTCA CCGGCATTCA GGCGCTGGTG CGGCTGCCGA TGGCGCAGGT CCGACGCGAC
CGCGCGGCCG GCCTCAACAC CGCCGGCTTC GTCACCGGCT ATCGTGGCTC GCCGCTCGGC
GGCTATGATC AGCAGCTCGT CGCCGCGCGC CATCATCTCG AACAATACAA CGTCAAATTC
CAGCCGGGCG TGAACGAAGA TCTCGCCGCC ACCGCGATCT GGGGCACGCA GCAGCTCAAC
CTGTCGCCCG GCGCGAAGTA CGACGGCATC ACCGGCATCT GGTACGGCAA GGGCCCGGGC
GTCGATCGCT GCGGCGACGT GTTTCGCCAT GCCAACGCGG CGGGCTCCGC CAAGAACGGC
GGCGTGCTGT GCCTCGCCGG CGACGATCAC GGCGCCAAGT CCTCGACCGT GCCGCATCAG
TCCGACCACG CCTTCATCGC CGCCTTGATG CCATACCTCT ATCCGTCGTC GATCCACGAG
ATGATCGAGA TGGGGCTGCT CGGCATCGCG ATGTCGCGTT ACTCGGGCTG CTGGGTCGGC
ATGAAGGTGA TCACCGAGAC GGTGGAGACC ACCGCGGAGA TCAATCTCGC CGACGAGATG
ACGCCGTTTG TGATTCCGAC CGACTTCGAG ATGCCGCCGG GCGGGCTGAA TCTGCGCTGG
CCGGACGATC GTTACGATCA GGACCGCCGG CTGCAGGACT ACAAGGGCTT CGCCGCGATC
GCGTTCGCCC GCGCCAACAA GGTCAACCGC ATCACCATGG ATTCACCGAA CGCGCGGTTC
GGCATCATGG CCTCGGGCAA GAGCTACGAG GACGTGCGCC AGGCGCTGCG CGAGCTCGGT
GTCGACGAGC AGGTCGCCGC TAAGATCGGC CTGCGGCTGT ACAAGATCGG CATGCCGTGG
CCGCTGGAGC CCGAAGGCGT GCAGGAATTC GCGCGCGGGC TCGAAGAGAT CTTCGTCGTC
GAAGAGCGCC GCGAGATCGT CGAGAACCAG GTCAAGCAGC TGTTGTTCGG GATGCGCGAG
CGGCCGCGCG TGATCGGCAA GATGGACGAC CACAACCATC GCTTCCTGCC GTTTGCCGAA
GAACTGAGCG TCGCCAAGGT CGCGACCTCG ATGGTCGACC GGCTGCTGGC GATGGAGATC
GATCCGACCA TCGCCGAGAT GCTGCGCGCC AAGGCCGACT GGTTCCACGG CCGCGACGCC
TCGCAGGTGC AGGCGGTGGT GCCGATCGCG CGCACGCCGT ATTTCTGCTC GGGCTGTCCG
CACAACACCT CGACCAAGGT GCCGGAAGGC AGTCGGGCGC TCGGCGGCAT CGGCTGTCAC
TTCATGTCGC TATGGATGGA TCGCTCGACC GAGACCTTCA CCCATATGGG CGGCGAGGGC
GTGCCGTGGA CCGGCATCGC GCCGTTCACC GACGAGAAGC ACATCTTCGC CAATCTCGGC
GATGGCACCT ACTTTCATTC CGGCAGCCTC GCGATCCGGC AGTCGATCGC CTCGAAGGCG
AACATCACCT ACAAGATCCT CTACAACGAC GCGGTGGCGA TGACCGGCGG TCAGCGTCAC
GACGGCGATC TGTCGCCGCA GCAGATCACC TATCAGCTTC ACTCCGAAGG CATCCGCGAG
ATCTATCTGG TCTCCGAGAC TCCCGACGCC TATCCGGCCG ACAGCATCGC GCCGGGCACG
CATCTGCGCC ACCGCGATGA GCTCGACGCG GTGATGAAGG AATGCCGCGA GATCAAGGGC
GCCTCCGCGA TCGTCTTCGT GCAGACCTGC GCGGCCGAGA AGCGCCGCCG CCGCAAGCGC
GGCCTGATGG AAGATCCGGC CCGCCGGGTG ATGATCAATG CCGCGGTGTG CGAGGGCTGC
GGCGACTGCT CGGTGCAGTC GAACTGCATC TCGGTCGAGC CGCTGGAGAC CGAGCTGGGG
CGCAAGCGCG CCATCAACCA GTCGACCTGC AACAAGGATT ATTCCTGCCT CAAGGGCTTC
TGCCCGTCCT TCATCACCAT CGACGGCGGC AAGCTGCGCA AGCGTGCGGC GGTCGATCTC
GGCGACCTCG GCAGCCTGCC GGAGCCGGCG GCGCGGCCGG GGCTCGACAA GCCCTACAAC
GTCGCGGTCG GCGGTGTCGG CGGCACCGGC GTGCTGACGA TCGGCGCGCT GCTCGGCATG
GCGGCGCACA TCGAAGGCAA GGCGTCGATG ATCCTCGACA TGTCGGGCCT GGCGCAGAAG
GGCGGCGCGG TGCTCAGCCA CGTCCGGCTG TCGAACAAGC CGGAGGACGT CACCTGTTCG
CGGATCGTTT CGGGCTCCGC GGACGTGCTG ATCGTTGCCG ACGAGGTGAT GGCGATTTCC
AAGGAGACGC TGTCGCTGTG TGAAGCGAGC CGCACCCACG GTGTCGTCAA CACCCACCTG
ATCCCGATCT CGGATTTCAT CCGCAACCGC GACTTCGACT TCCAAACCCG CAAGGTCAAT
AGCGTGCTCG AAGCCGCGCT ACGCAAGGAC TCGGCGTTCC TGGATTTCAC CAAGGCGGCC
GAGACGCTGC TCGGCGACTC GATCGCCACC AACATGATGA TGATGGGCTT CGCCTATCAG
CTGGGATTGT TGCCGCTGTC GGCGACCGCG ATCGAGCAGG CGATCGAGCT CAACGGCGTC
TCGATCAAGA TGAACACCCA GGCGTTCCGG CTCGGCCGGC TCGCCGCCGC CGATCCGGCG
CGGCTGGCCT CGCTGCTGCA CGGCGCCGAT CACAGCGTCG CCGGCAAGAC CCAGGGTGAG
ATGTCGCTCG ACGAGATCAT CGCGCATCGC AGCGCGTTGC TCACGGCGTA CCAGAGCAAG
CGGCTGGCCA AGCGCTACAC CGACCTCGTT GCCACGGTGC GCAGCGCCGC CGACGCCGGC
GGTTACGGCG AGGCGCTGCC GCGTGCGGTG GCGCTGAACT ACGCCAAGCT GCTCGCTTAC
AAGGACGAGT ACGAGGTCGC GCGACTGCTG ACCGAGCCGG GCTTCGAACA GCAGATCCGC
GACCAGTTCG AAGGCGATTA CAAGATCAGC TTCAACCTCG CGCCGCCCAT TTTGCCGGGC
GTCGATCTCA CCGGCCGGCC GAAGAAGCGT CAGTTCGGCG AGGCGATGCG CCCGGTGTTC
CGGACGATGG CGAAGCTGAG CTTCCTGCGC GGCACGCCGC TCGATCCGTT CGGCTATCAC
CCCGAGCGCA AGCTGGAGCG GAAGCTGATC GCCGATTACG AGGCCGATGT CGCCAGCGTG
CTGCAGCATC TGTCGCCGGC GACGATCGAC ACCGCAGTCG AATTGCTGTC GATGCCCGAT
CGCATTCGTG GCTACGGCCC GATCAAGCAG AAGTCGGTCG ACGACACCGC GCCGCGCTTT
GCCGAACTCC GCGCCAATTT GCGCGATCCG CAACCCGCCC CGCCGCGGCA GATGGCGGCG
GAGTAG
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| Protein sequence | MGIDQGPISL DQKYTQHSGH VFLTGIQALV RLPMAQVRRD RAAGLNTAGF VTGYRGSPLG
GYDQQLVAAR HHLEQYNVKF QPGVNEDLAA TAIWGTQQLN LSPGAKYDGI TGIWYGKGPG
VDRCGDVFRH ANAAGSAKNG GVLCLAGDDH GAKSSTVPHQ SDHAFIAALM PYLYPSSIHE
MIEMGLLGIA MSRYSGCWVG MKVITETVET TAEINLADEM TPFVIPTDFE MPPGGLNLRW
PDDRYDQDRR LQDYKGFAAI AFARANKVNR ITMDSPNARF GIMASGKSYE DVRQALRELG
VDEQVAAKIG LRLYKIGMPW PLEPEGVQEF ARGLEEIFVV EERREIVENQ VKQLLFGMRE
RPRVIGKMDD HNHRFLPFAE ELSVAKVATS MVDRLLAMEI DPTIAEMLRA KADWFHGRDA
SQVQAVVPIA RTPYFCSGCP HNTSTKVPEG SRALGGIGCH FMSLWMDRST ETFTHMGGEG
VPWTGIAPFT DEKHIFANLG DGTYFHSGSL AIRQSIASKA NITYKILYND AVAMTGGQRH
DGDLSPQQIT YQLHSEGIRE IYLVSETPDA YPADSIAPGT HLRHRDELDA VMKECREIKG
ASAIVFVQTC AAEKRRRRKR GLMEDPARRV MINAAVCEGC GDCSVQSNCI SVEPLETELG
RKRAINQSTC NKDYSCLKGF CPSFITIDGG KLRKRAAVDL GDLGSLPEPA ARPGLDKPYN
VAVGGVGGTG VLTIGALLGM AAHIEGKASM ILDMSGLAQK GGAVLSHVRL SNKPEDVTCS
RIVSGSADVL IVADEVMAIS KETLSLCEAS RTHGVVNTHL IPISDFIRNR DFDFQTRKVN
SVLEAALRKD SAFLDFTKAA ETLLGDSIAT NMMMMGFAYQ LGLLPLSATA IEQAIELNGV
SIKMNTQAFR LGRLAAADPA RLASLLHGAD HSVAGKTQGE MSLDEIIAHR SALLTAYQSK
RLAKRYTDLV ATVRSAADAG GYGEALPRAV ALNYAKLLAY KDEYEVARLL TEPGFEQQIR
DQFEGDYKIS FNLAPPILPG VDLTGRPKKR QFGEAMRPVF RTMAKLSFLR GTPLDPFGYH
PERKLERKLI ADYEADVASV LQHLSPATID TAVELLSMPD RIRGYGPIKQ KSVDDTAPRF
AELRANLRDP QPAPPRQMAA E
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