| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3588 |
|---|
| Symbol | |
|---|
| ID | 6411263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 3838452 |
|---|
| End bp | 3838850 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642713467 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001992563 |
|---|
| Protein GI | 192291958 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4852] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCGAT ACGGTCTACT CTATCTGGCA ACATTCATTG TCCTGATTCC GCTCGACTTT
CTATTCCTCG GCACGATCGC CAAGAGCTTC TTCCAGTCGC AGGTCGGCGA GATGCTCGGC
GAGGTGAGGC TGCTGCCGGC TGTGCTGTTC TACCTGCTCT ACGTCGTCGG CATCGTCATC
TTCGTCAACG GCTCGGCGCA GGCGACCTGG CAATCCTCGT TAGTGTACGG GGCGTTGTTC
GGCGTGTTCT GCTACGCGAC CTTCGAGTTG ACCTCGCTGG CGCTGCTGAA GCACTGGACC
TGGCCGGTGG TCGCAGTCGA CATCTCCTGG GGCGCGTTCG TCACGGCGGT GTCGGGGACG
CTTGGCCTGC TGCTCGCCGA CTGGTGGTCG CCGCGCTGA
|
|---|
| Protein sequence | MKRYGLLYLA TFIVLIPLDF LFLGTIAKSF FQSQVGEMLG EVRLLPAVLF YLLYVVGIVI
FVNGSAQATW QSSLVYGALF GVFCYATFEL TSLALLKHWT WPVVAVDISW GAFVTAVSGT
LGLLLADWWS PR
|
|---|
| |