| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3579 |
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| Symbol | lipB |
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| ID | 6411254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3827297 |
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| End bp | 3828034 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713458 |
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| Product | lipoate-protein ligase B |
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| Protein accession | YP_001992554 |
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| Protein GI | 192291949 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAACG TCTCCACTTC CCCCCGCCAG ACGCTGGATT GGACCGCCTT GAAGCCCGCC
GATGGCTCGC CGGCGGTGGA ATGGCGCATT TCCGATTCGC CGGTGCCGTA TCCGGAGGCG
GTGGCGACGA TGGAGGCACG CGCCGCCGCG ATCGCCGCGG GCGAAGCGAC CGAACTGGTC
TGGCTGCTGG AGCACCCACC GCTCTACACC GCAGGCACCA GCGGCCATGC CTCCGACCTG
CTGGAGGAGC GTTTCCCGCT GTTCACCACC GGCCGCGGCG GCCAGCTAAC CTATCACGGC
CCCGGCCAGC GCGTGGCCTA TGTGATGCTC GACCTGAAGC GCCGACGCCC AGACGTGCGC
GCCTATGTGG CTGCGCTCGA ACAATGGATC ATTGCCACCC TCGACGCCTT CAACATCCGC
TGCGAGCGTC GCGAGGATCG GGTTGGCGTC TGGGTCCGCC GCCCTGACAA GGGCGTCGGT
TACGAGGATA AGATCGCGGC GATCGGCGTC CGGCTGAAAC GCTGGGTGTC GCTGCACGGC
ATCGCCATCA ACGTCGAACC CGACCTGTCG CATTTCAAGG CGATCGTGCC CTGCGGAATC
AGCGATCCGC GCTACGGCGT CACCAGCCTC GTCGACCTCG GCCTGCCGGT GGTCATGACC
GACGTCGACA TTGCACTCCG CGCGGCGTTC GAGAACATCT TCGGCGAAAC CCGCGCGGCG
GCGCCTGCGG GCATCTGA
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| Protein sequence | MINVSTSPRQ TLDWTALKPA DGSPAVEWRI SDSPVPYPEA VATMEARAAA IAAGEATELV
WLLEHPPLYT AGTSGHASDL LEERFPLFTT GRGGQLTYHG PGQRVAYVML DLKRRRPDVR
AYVAALEQWI IATLDAFNIR CERREDRVGV WVRRPDKGVG YEDKIAAIGV RLKRWVSLHG
IAINVEPDLS HFKAIVPCGI SDPRYGVTSL VDLGLPVVMT DVDIALRAAF ENIFGETRAA
APAGI
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