| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3558 |
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| Symbol | |
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| ID | 6411232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3807987 |
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| End bp | 3809354 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642713436 |
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| Product | hypothetical protein |
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| Protein accession | YP_001992533 |
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| Protein GI | 192291928 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATGA TTTCCCTTGC CGCCCAACTG ACGCGCGCGG CGCGCCGCTT CCCGCAGGCG
AACGGGGGAA ACATCGCCGT GATCTTCGCC CTGGCGCTGG TGCCGTTGCT CGGCTTCATC
GGCGTGGCTG TGGACTATTC CCGCGCCAAC AACGCCCGCA CCTCGCTGCA GAACGCGCTC
GATTCGGCCG CCCTGATGCT GTCGCGCGAT CTCGGCGTCG GCACCATCAC GCCCGACCAG
GTGTCGAGCA AGGCGCAGAC TTATTTCAAC AGCCTCTACA CCAACAAAGA GACCGGCGCC
GTCACGGTGA CCGCAACCTA TACGGCGAAG GACGGCTCCG GCTCGTCCAC CATCGCGATG
AGCGGCCAAG GCGCGGTCCA GACTCAATTC ATGAAGATCC TCGGCTTCCA AACGATGGCG
ATCGGATCCT CGACGACCAC GACCTGGGGC GGCACCCGCC TCCGCGTCGC GATGGCGCTC
GACGTCACCG GGTCGATGGC CTCGGCCGGC AAGATGTCGG CCATGAAGAC GGCAGCGAAG
AATCTGGTCG ATAGCCTCCG CGCGAGCGCC CAAACCGCCG ACGACGTCTA CATCTCGGTG
GTGCCGTTCG CCCAGATGGT CAACGTCGGC AGCAGCAATC GGAACGCGAA CTGGGTCAGA
TGGGACCTTT GGGACGAAAG CAACGGCAGC TGTAGCTCTT GGTGGTACTC GACCAAATCC
AGCTGCGAAT ATGCCGGTCG AACCTGGACC GCGACGAGTC ACAACCAATG GGCCGGCTGC
GTGACCGATC GCGATCAGCC CGCGGACACC ACCAAGGATG TTCCAACGAG TTACGCCACT
CGGTTTCCGG CCGTCGATTA CGACGCCTGC CCCCAGCAAC TGCTGGGGAT GACGTCGGCC
TACTCATTGT CGAATGCGAC CACGATCAAG AACAAGATCG ACGCACTATC GCCGAACGGC
GGTACCAACC AGGCAATCGG CATGCACTGG GCCTGGATGT CACTGCGCAC CGGAGATCCG
CTCAACACCC CGGCAAAGGA CTCCAACTAC AAATACACCG ATGCGATCAT TCTGCTGTCG
GACGGTTTGA ACACGGTCGA CCGTTGGTAC GGCAACGGCC GCGACTGGTC GCCCCAGGTC
GACGCGCGTC AGCGGATCCT GTGCGACAAC ATCCGGGCGT CGGCGACCAA CACCAACCCG
GTCGTCATCT ATACGATCCA GGTCAACACC GATGGCGATC CGGAATCTAC GGTATTGAAA
TACTGCGCCG ATAGCGGCAA CTTCTTCGCG ACCACGACGT CCAGCGGCAT CGGGACCGCT
TTCGCCCAGA TCGGCTCCTC TCTCTCCAAG CTCCGCGTCG CGAAGTAA
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| Protein sequence | MSMISLAAQL TRAARRFPQA NGGNIAVIFA LALVPLLGFI GVAVDYSRAN NARTSLQNAL
DSAALMLSRD LGVGTITPDQ VSSKAQTYFN SLYTNKETGA VTVTATYTAK DGSGSSTIAM
SGQGAVQTQF MKILGFQTMA IGSSTTTTWG GTRLRVAMAL DVTGSMASAG KMSAMKTAAK
NLVDSLRASA QTADDVYISV VPFAQMVNVG SSNRNANWVR WDLWDESNGS CSSWWYSTKS
SCEYAGRTWT ATSHNQWAGC VTDRDQPADT TKDVPTSYAT RFPAVDYDAC PQQLLGMTSA
YSLSNATTIK NKIDALSPNG GTNQAIGMHW AWMSLRTGDP LNTPAKDSNY KYTDAIILLS
DGLNTVDRWY GNGRDWSPQV DARQRILCDN IRASATNTNP VVIYTIQVNT DGDPESTVLK
YCADSGNFFA TTTSSGIGTA FAQIGSSLSK LRVAK
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