| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3539 |
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| Symbol | |
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| ID | 6411213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3789172 |
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| End bp | 3790419 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642713417 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001992514 |
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| Protein GI | 192291909 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTCA GCGAGCCGGC CCTGCGCGTC GCGGAAGAAT CTCGACCCGA ACCGCCGCCG
AAGCCCGGCC CGGGCGGCGC CTCGGTGCCG GGGCCCGCAA TGGGCGCCGG GCTGACGCTG
GCGATGGCGG CGGCCGCGGG CATCAGCGTT GCCAATATCT ATTACAACCA GCCTATGCTG
GGGGTGATCG AGCGTGACCT CGGCAATCCG GCGCTGACCG GGATGATCCC GACGGCGACT
CAACTCGGCT ACGCGGTCGG TCTATTCCTG CTGGTGCCGC TCGGCGACCT GACCGACCGG
CGGCGGCTGA TTGCCGGCCA GTTCGTGCTG CTGGCGGTCG CGGCTGCGCT GGTGGCGCTG
GCGCCGTCGG CCTGGTTGAT CATTGCCGCG TCGCTGGCGC TCGGCGCCTG CGCGACCGTG
GCGCAGCAGG TGGTGCCGTT CGCCGCGGCG CTGGCGGCAC CGGAGCGGCG CGGCAAGACC
ATCGGCCTGG TGATGGCCGG GCTGTTGTGC GGCATCCTGC TCAGCCGGAC GGTGGCCGGC
TTTGTTGCCG GCCATCTCGG CTGGCGCGAG ATGTTCTGGC TGGCGGTGCC GGCGGCGCTC
GCGGCCGCCG CGCTGATGGC GTGGCTGCTG CCGCGCCATC ACGGTCACCT CGATATCAGC
TATGGCGCCG CGCTGAAGTC GCTCGCGTCG CTGTGGCGCG AGCAGCGGGA TCTCCGGCGG
GGGACCGCGG TGCAGGCGGC GCTGTTCGCC TCGTTCAGCG TGTTCTGGAC GGTGCTGGCG
CTGCATCTGC AGGAGCCGAA GTTCGGGCTC GGGGCCGAGG CGGCGGGCCT GTTCGGCCTG
GTTGGCGTGG TTGGCGTGTT GGCGGCGCCG ATCTCCGGCC GGATCGCCGA CCGAAGTGGA
CCGGGACCGG TGATCGCGAT CGGCGCGGCT CTGGTGCTGG CGTCGTGGGT GTTGTTCGGT
CTGTGGGGCA GCGTCGTTGG ACTGCTGATC GGCGTCGTGG TGCTGGATTT CGGTCTGCAG
AGCGCGCTGA TCTCCAACCA GCACATCGTC TACGCGTTGG TGCCGGAAGC GCGAAACCGC
CTCAACACCG TGTTCATGAC CGGGATGTTC ATCGGCGGAT CGGTCGGTTC TGCCGGCGCG
GCCTTCGCCT GGGCGCACGG CGGCTGGACG GTGGTCAGCC TCTATGGCGG CGCGCTGGCG
GCAATCGCCT TGCTACTCGA ACTGACGGCG CGTTGGTCCC GCCGTTAG
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| Protein sequence | MSVSEPALRV AEESRPEPPP KPGPGGASVP GPAMGAGLTL AMAAAAGISV ANIYYNQPML
GVIERDLGNP ALTGMIPTAT QLGYAVGLFL LVPLGDLTDR RRLIAGQFVL LAVAAALVAL
APSAWLIIAA SLALGACATV AQQVVPFAAA LAAPERRGKT IGLVMAGLLC GILLSRTVAG
FVAGHLGWRE MFWLAVPAAL AAAALMAWLL PRHHGHLDIS YGAALKSLAS LWREQRDLRR
GTAVQAALFA SFSVFWTVLA LHLQEPKFGL GAEAAGLFGL VGVVGVLAAP ISGRIADRSG
PGPVIAIGAA LVLASWVLFG LWGSVVGLLI GVVVLDFGLQ SALISNQHIV YALVPEARNR
LNTVFMTGMF IGGSVGSAGA AFAWAHGGWT VVSLYGGALA AIALLLELTA RWSRR
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