Gene Rpal_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3533 
Symbol 
ID6411207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3780887 
End bp3782077 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content66% 
IMG OID642713411 
Producthypothetical protein 
Protein accessionYP_001992508 
Protein GI192291903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCA ACAAGCACAT CGCACGAACC GTCTGGGCGC TGATCTTCAC CGTGCTGTTG 
GCGCTGCCGG TCGTGACGGC GTGGAATCTG ATCGCCGCGC CGATGAACCC GCGCCTGCTT
GCGATCATCG GCAAGAGGCT TGGCGGCGTC ACCGCCAAAG ACCCGCTCGA CTGGTCGTGG
AAGGCGGTCG GCGACGGCAC ATTGCAGAAG GCGCTGGCGC TCCGGGTGGC CGAGGCCAAT
CCGCTGCGGC CGTGGTTGAT CCGGAGCTAC AACCAGCTCC GCGCCTCTCT GTTCGACGAA
TTGACCGCGC AGGGACTGGT GCGCGGCAAG GATCGGCAGC TGCTCGAGAC CTTCTACCTC
GACGACTACT GCCAGCGGAC CGTCGGCATG GCCGATGAAC GCGCCCGCGA CAGGATCCCG
CTCCTGAAGG ACATTCAGGA TTTCTACCGC GCGCGTGGCG GCGTGTTCCT GTTCGTCGTC
ACCCCGTCGA AGCTCGGTTA CATGCCGGAA GCCTTCACAG GCACCCGCCC CTGCCCCAGC
ACCGAGGCGG CCCGCAACGA ACTACGGCCG AGGTACGTCG AGCTGCTCCG TCAGGCGGGC
ATCGAGGCCT TCGACGCCGC CGCGCTGGTC TATGCGCAGC GGCATGTCCA GGCCATGCCG
CTGTTTCCCC GCGATGGCGC GCATTGGAAT GATCTCGGGC TCGCGATCGC CAGCGTTGCG
ATCCTAAACC GGCTGAACCA GGTCGCCGGC CGCACCGTCG CAGCGCCTCT GACCTATTCG
ATGACAATCG ACGACCAGGC TACCCAACGG GACATCGACC TGATCGGCTT CCAGAACCGG
CTGTTCGATC CGCCCCCGAT CCGCACGCCC CACGTGCAGT ACCGCTCGGA GATCGACTGC
AGCACCTTCC CCGGCCGCGA TGCGAACGCC GCCATCGTCG GCGGGTCTTT CATTCGGATG
ACCGCCGAGG TCCTGATCCG CGACGCCTGC ATGGCCCGGC TCGACTCCTA TTTCTATCTG
AAGCTCGAGC GGGAGGGCGG TATCCCGTTC CGAACGCTCG ACCGCGACCT CGGTCCGGCC
CAGCTCGCCC GGTTGCGCGA CACCCAAATT CTCATCCTGG AAGAGAACGA GTCGTTCCTG
GGCAAATCCG CCCACGTCCG CGCGCTGCAC GAAATCCTGA TGCAGCGCTG A
 
Protein sequence
MAINKHIART VWALIFTVLL ALPVVTAWNL IAAPMNPRLL AIIGKRLGGV TAKDPLDWSW 
KAVGDGTLQK ALALRVAEAN PLRPWLIRSY NQLRASLFDE LTAQGLVRGK DRQLLETFYL
DDYCQRTVGM ADERARDRIP LLKDIQDFYR ARGGVFLFVV TPSKLGYMPE AFTGTRPCPS
TEAARNELRP RYVELLRQAG IEAFDAAALV YAQRHVQAMP LFPRDGAHWN DLGLAIASVA
ILNRLNQVAG RTVAAPLTYS MTIDDQATQR DIDLIGFQNR LFDPPPIRTP HVQYRSEIDC
STFPGRDANA AIVGGSFIRM TAEVLIRDAC MARLDSYFYL KLEREGGIPF RTLDRDLGPA
QLARLRDTQI LILEENESFL GKSAHVRALH EILMQR