Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3533 |
Symbol | |
ID | 6411207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3780887 |
End bp | 3782077 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642713411 |
Product | hypothetical protein |
Protein accession | YP_001992508 |
Protein GI | 192291903 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGATCA ACAAGCACAT CGCACGAACC GTCTGGGCGC TGATCTTCAC CGTGCTGTTG GCGCTGCCGG TCGTGACGGC GTGGAATCTG ATCGCCGCGC CGATGAACCC GCGCCTGCTT GCGATCATCG GCAAGAGGCT TGGCGGCGTC ACCGCCAAAG ACCCGCTCGA CTGGTCGTGG AAGGCGGTCG GCGACGGCAC ATTGCAGAAG GCGCTGGCGC TCCGGGTGGC CGAGGCCAAT CCGCTGCGGC CGTGGTTGAT CCGGAGCTAC AACCAGCTCC GCGCCTCTCT GTTCGACGAA TTGACCGCGC AGGGACTGGT GCGCGGCAAG GATCGGCAGC TGCTCGAGAC CTTCTACCTC GACGACTACT GCCAGCGGAC CGTCGGCATG GCCGATGAAC GCGCCCGCGA CAGGATCCCG CTCCTGAAGG ACATTCAGGA TTTCTACCGC GCGCGTGGCG GCGTGTTCCT GTTCGTCGTC ACCCCGTCGA AGCTCGGTTA CATGCCGGAA GCCTTCACAG GCACCCGCCC CTGCCCCAGC ACCGAGGCGG CCCGCAACGA ACTACGGCCG AGGTACGTCG AGCTGCTCCG TCAGGCGGGC ATCGAGGCCT TCGACGCCGC CGCGCTGGTC TATGCGCAGC GGCATGTCCA GGCCATGCCG CTGTTTCCCC GCGATGGCGC GCATTGGAAT GATCTCGGGC TCGCGATCGC CAGCGTTGCG ATCCTAAACC GGCTGAACCA GGTCGCCGGC CGCACCGTCG CAGCGCCTCT GACCTATTCG ATGACAATCG ACGACCAGGC TACCCAACGG GACATCGACC TGATCGGCTT CCAGAACCGG CTGTTCGATC CGCCCCCGAT CCGCACGCCC CACGTGCAGT ACCGCTCGGA GATCGACTGC AGCACCTTCC CCGGCCGCGA TGCGAACGCC GCCATCGTCG GCGGGTCTTT CATTCGGATG ACCGCCGAGG TCCTGATCCG CGACGCCTGC ATGGCCCGGC TCGACTCCTA TTTCTATCTG AAGCTCGAGC GGGAGGGCGG TATCCCGTTC CGAACGCTCG ACCGCGACCT CGGTCCGGCC CAGCTCGCCC GGTTGCGCGA CACCCAAATT CTCATCCTGG AAGAGAACGA GTCGTTCCTG GGCAAATCCG CCCACGTCCG CGCGCTGCAC GAAATCCTGA TGCAGCGCTG A
|
Protein sequence | MAINKHIART VWALIFTVLL ALPVVTAWNL IAAPMNPRLL AIIGKRLGGV TAKDPLDWSW KAVGDGTLQK ALALRVAEAN PLRPWLIRSY NQLRASLFDE LTAQGLVRGK DRQLLETFYL DDYCQRTVGM ADERARDRIP LLKDIQDFYR ARGGVFLFVV TPSKLGYMPE AFTGTRPCPS TEAARNELRP RYVELLRQAG IEAFDAAALV YAQRHVQAMP LFPRDGAHWN DLGLAIASVA ILNRLNQVAG RTVAAPLTYS MTIDDQATQR DIDLIGFQNR LFDPPPIRTP HVQYRSEIDC STFPGRDANA AIVGGSFIRM TAEVLIRDAC MARLDSYFYL KLEREGGIPF RTLDRDLGPA QLARLRDTQI LILEENESFL GKSAHVRALH EILMQR
|
| |