| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3522 |
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| Symbol | |
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| ID | 6411196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3768370 |
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| End bp | 3769446 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642713400 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001992497 |
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| Protein GI | 192291892 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0118514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGCCGG ATCGCCGTCT CCTCGACCTG TTCGCTATCG AATGTCCGAT TCTGCTCGCC
CCGATGGCGG GCGCGATGGA TGCTGAACTT GCTATTGCCG CGGCGCGCGG CGGGGCGCTG
GCCTCGCTGC CGTGCGCGAT GCTGTCGCCG GACAAAGCGC GCGAGCAGGT CGGGATCTTC
CGGCAGCAGA TTTCCGCGCC GATCAATCTG AATTTCTTCT GCCATCAGGC GGTGACGCCG
GATGCCGCGC GCGAACAGAT CTGGCGCAAG CGGTTGACGC CTTACTTCAC CGAACTCGGG
CTCGACCCGG CGATGCCGGC GCCCGCGGCG AGCCGGGCGC CGTTCGATGC GGCGATGTGC
GCGCTGGTCG AGGAGTTGAA GCCCGAAGTC GTCAGCTTTC ATTTCGGTCT TCCTGAGGCC
GCGCTGCTCG ATCGCGTCAA AGCGACCGGC GCCAAAGTGA TCGCAACCGC CACGATCGTG
CGCGAGGCGA TCTGGCTGGA AGAGCACGGC GTCGACGCGG TGATCGTGCA GGGCGCGGAA
GCCGGCGGCC ATCGCGGCAT GTTCATGACC GACGACATTG CGCAGCAGCC TGGATTATTC
GCGCTGCTGC CGCAGGTGGT CGATGCGGTG CGGGTGCCGG TGATCGCGGC GGGCGGGATC
GCGGACGGCC GCGGCATCGC AGCGGCGTTC GCGCTCGGCG CCGCCGGCGT GCAGATCGGT
ACCGCGTATC TGCGCTGCCC GGAATCCCGG ACCAGCGCGC TGGTGCGGGT GCAGCTCGCG
CAGGGCACCG ACGAAGCAAC CGTGATCACC AATGTGATGA CCGGGCGGCC GGCGCGCGGC
GTCGCCAATC GCCTGATGCG CGAGGTCGGA CCGGTGTCGC CAGACGCGCC GGCGTTCCCG
CACGCGGCCT CGGCCCTGGG ACCGCTGAAG GCGGCCGCCG AGCAGCTTGG CAAAACCGAC
TTCACCAATC TGTGGGCGGG GCAGGCGGTG CGGCTCGGCC GCGACATGCC GGCGGCCGAA
CTCACCCGGG CGCTGGCCGG CGCAGCCGTG GCGCGCCTCA GCCAGCTCGC GGGCTGA
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| Protein sequence | MWPDRRLLDL FAIECPILLA PMAGAMDAEL AIAAARGGAL ASLPCAMLSP DKAREQVGIF
RQQISAPINL NFFCHQAVTP DAAREQIWRK RLTPYFTELG LDPAMPAPAA SRAPFDAAMC
ALVEELKPEV VSFHFGLPEA ALLDRVKATG AKVIATATIV REAIWLEEHG VDAVIVQGAE
AGGHRGMFMT DDIAQQPGLF ALLPQVVDAV RVPVIAAGGI ADGRGIAAAF ALGAAGVQIG
TAYLRCPESR TSALVRVQLA QGTDEATVIT NVMTGRPARG VANRLMREVG PVSPDAPAFP
HAASALGPLK AAAEQLGKTD FTNLWAGQAV RLGRDMPAAE LTRALAGAAV ARLSQLAG
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