| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3504 |
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| Symbol | |
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| ID | 6411178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3752286 |
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| End bp | 3753572 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713383 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001992480 |
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| Protein GI | 192291875 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0374275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGG AAGCCGCAGC GCAGCAGACG CCGGTGCCCG GCATGACCGG GCCGCGCCGC
GCCGCCGTCG GCTTCATCTT CATCACCATC GCACTCGATA TGCTCAGCCT CGGCATGATC
CTGCCGATCC TGCCGAAGCT GATCGAGAGT TTCTCCGACG ACAACACCGC TAACGCGGCG
CGGATCTACG GGCTGTTCGG CACCGCCTGG GCTCTGATGC AGCTGTTCGC CTCGCCGATC
CTCGGCGGGC TGTCGGACCG GTTCGGGCGG CGCCCGGTGA TCCTGCTGTC CAATCTGGGG
CTCGGCCTTG ACTACATCCT GATGGCGCTG GCGCCGTCGC TGTGGTGGCT GTTTGTCGGC
CGGGTGATCT CGGGCATCAC TTCGGCCAGC ATCTCGACCT CGTTCGCCTA TATCGCCGAC
GTCACACCGG CGGAAAAACG TGCGGCGGTG TTCGGCATGG TCGGCGCCGC GTTCGGACTC
GGCTTCACCT TTGGGCCGGC GATCGGCGGT CTGCTCGGCG GTGTGGATCC GCGGTTGCCG
TTCTGGGTGG CTGCGGCGCT GAGCCTGGCG AATACGTTGT ACGGCCTGTT CGTATTGCCG
GAGTCGCTAC CGCGAGACCG ACGCTCGCCG TTCCGCTGGA AGTCCGCCAA TCCGATCGGG
GCGGTGCGGC TGCTGAGTTC GAACGCGCGA TTGGCTGCGC TTGCGGTGGT CGAGTTCTGT
GCCGAGGTGG CGCATGTCGC GCTGCCGGCA ACCTTCGTGC TCTACACCGG CTATCGCTAT
GCCTGGGATC AGACCACGAT CGGTCTGGCG CTGGCGTTCG TCGGCGTCTG CACCACCATC
GTGCAGGGCG GGCTGGTCGG CCCCGCGGTG AAGCTGCTCG GCGAGCGCAA CGCCCAGATC
ATCGGCTATG GCGGCGGTGC GCTCGGCTTC CTGATCTATG CGCTGGCGCC GAGCGGGACG
CTGTTCTGGA TCGGCATTCC GGTGATGACG CTGTGGGGCA TCGCCGGGCC GGCAACCTCG
GGGATGATGA CCCGGCTGGT CTCGCCGTCG CAGCAGGGCC AGTTGCAGGG CGCCACCACC
AGCGTCAAGA GCGTCGCCGA ACTGATTGGC CCGTTCCTGT TCACGATGAT CTTCGCGTAC
TTCATCGATG CCGGCGCACC GCTGCAGCTG CCCGGGGCGC CGTTCCTGCT CGCCGGTGCG
CTTCTGGTCG TGTCCGTCGT GATCGTGGCC TTCGCATCGC CCGCCGCCGA CAGCAAACAG
GCGCCGCAAG CGGCGCCTGA AAGCTGA
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| Protein sequence | MTEEAAAQQT PVPGMTGPRR AAVGFIFITI ALDMLSLGMI LPILPKLIES FSDDNTANAA
RIYGLFGTAW ALMQLFASPI LGGLSDRFGR RPVILLSNLG LGLDYILMAL APSLWWLFVG
RVISGITSAS ISTSFAYIAD VTPAEKRAAV FGMVGAAFGL GFTFGPAIGG LLGGVDPRLP
FWVAAALSLA NTLYGLFVLP ESLPRDRRSP FRWKSANPIG AVRLLSSNAR LAALAVVEFC
AEVAHVALPA TFVLYTGYRY AWDQTTIGLA LAFVGVCTTI VQGGLVGPAV KLLGERNAQI
IGYGGGALGF LIYALAPSGT LFWIGIPVMT LWGIAGPATS GMMTRLVSPS QQGQLQGATT
SVKSVAELIG PFLFTMIFAY FIDAGAPLQL PGAPFLLAGA LLVVSVVIVA FASPAADSKQ
APQAAPES
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