| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3503 |
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| Symbol | |
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| ID | 6411177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3751039 |
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| End bp | 3752265 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713382 |
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| Product | putative ABC transporter, substrate binding protein |
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| Protein accession | YP_001992479 |
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| Protein GI | 192291874 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.10294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGGAG TGTTCTCGCA CGCCATCGCT GCCGCGTTGG TGAGTGCGGC GTTGATCCTG
CCGGCGTCGG CCCAGTCCGG CGACAAGACC GCCAAGATCG GCGTACTTAA CGACATGTCG
AGCCTGTACG CCGACATCGG CGGACCGAAC TCGGTCGTCG CCGCCAAGAT GGCGATCGCC
GATTCCGGGC TCGAAGCAAA AGGCTGGAAG ATCGAACTGG TCTCCGGCGA TCACCAGAAC
AAACCGGACA TCGGCGTCAA TCTGGCGCGG CAGTGGATCG ATGTCGACAA GGTCGACCTG
ATCACCGACA CGCCGAACTC CGGCGTCGCG CTGGCGATCA GCAATCTGGT CAAAGAGAAG
AACAGCATCC TGATGAATTC AGGAGGCGCC AGCGCCGATC TGACCGGCAA GGCGTGCAAC
GCCAACACCA TCTCGATGAC TTACGACACC TACATGCTGG CGCACGGCAC TGGTCAGGCC
CTGACCAAGG CCGGCGGTGA TACTTGGTTC TTCCTCACCG CCGACTACGC GTTCGGCGCC
GCGCTCGAGC GCGACACCAC CGCGGTCGTC AAGGCCAATG GCGGCAAGGT CATCGGCAGC
GTCAAGCATC CGCTGAATAC ACCGGACTTC TCGTCGTTCC TGCTGCAGGC GCAGGCGTCG
AAGGCCAAGG TGATCGGCCT CGCCAATGCC GGCGGCGACA CCACCAACTC GATCAAGCAG
GCCGCCGAGT TCGGCATCAC CGCGGGCGGC CAGAAGCTGG CCGCGCTGCT GCTGTTCATC
AACGACGTGC ACTCGCTCGG GCTGAAGACG GCTCAAGGCC TGACCTTTAC CGAATCCTAC
TATTGGGACC TCAACGACAA CACGCGCGCG TTCGCGGACC GCTTCCAGAA GCAGGCTAAG
AACAACGCCA AGCCGTCGAT GACCCAGGCC GGCGTGTACG CCGCGGTGCT GCACTATCTG
AAGACTCTTG AAGCGATGGG CGGCAATCCG CATGACGGCG CCAAGGTCGT CGCCAAGATG
AAGGAGATCC CGGCGGACGA TCTGCCGTTC GGCAAGTCGG TGATCCGCGC CGATGGACGT
CGCTTGGTGC CGGCGTTCCT GTTCGAAGTG AAGTCGCCGG CCGAATCCAA GGGCCCGTGG
GACTACTACA AGAAGATCGC CGACATCTCC GCCGAAGACG CTGCGCGTCC GCTGGCGGAC
AGCGAGTGCC CGCTGATCAA GAAGTAA
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| Protein sequence | MRGVFSHAIA AALVSAALIL PASAQSGDKT AKIGVLNDMS SLYADIGGPN SVVAAKMAIA
DSGLEAKGWK IELVSGDHQN KPDIGVNLAR QWIDVDKVDL ITDTPNSGVA LAISNLVKEK
NSILMNSGGA SADLTGKACN ANTISMTYDT YMLAHGTGQA LTKAGGDTWF FLTADYAFGA
ALERDTTAVV KANGGKVIGS VKHPLNTPDF SSFLLQAQAS KAKVIGLANA GGDTTNSIKQ
AAEFGITAGG QKLAALLLFI NDVHSLGLKT AQGLTFTESY YWDLNDNTRA FADRFQKQAK
NNAKPSMTQA GVYAAVLHYL KTLEAMGGNP HDGAKVVAKM KEIPADDLPF GKSVIRADGR
RLVPAFLFEV KSPAESKGPW DYYKKIADIS AEDAARPLAD SECPLIKK
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