| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3499 |
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| Symbol | |
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| ID | 6411173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3746223 |
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| End bp | 3747680 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713378 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001992475 |
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| Protein GI | 192291870 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAG CTTCCTCCTC CTTCGTCTGT CAGAACTGCG GTGCGGCGTT CAATCGCTGG
CAGGGCAAAT GCGAGGCCTG CGGCGAGTGG AATACGCTGG TCGAGGAAGC CGGTGACAAC
GCGGTGCCGG TGTCGATCCG CGCCAAGCGC CGCGGCCGGA CGTTCAAGCT GGAGTCGCTC
GCCGGCAAGA GCAACGACGC CCCTCGCCTG CCCTCCGGCA TGGCCGAACT CGACCGCGTC
ACCGGCGGCG GCTTCGTGCG CGGCTCTGTG CTGCTGGTCG GCGGCGATCC GGGGATCGGC
AAGTCGACGC TGCTGACCCA GGCCACAAGC CTGATGGCCA AGGCCGGTCA CCGCACCGTT
TACATTTCCG GCGAAGAAGC GATTGCCCAG GTGCGGCTGC GCGCCGAACG GCTCGGCCTC
GCCTCGGCAC CGGTCGAGCT CGCCGCCGAA ACGTCGGTCG AGGACATCGT CGCGACGTTG
TCCGAAGGCG CGACGCCGAA GCTGATCGTG ATCGATTCAA TTCAGACGAT GTGGACCGAC
ACAGTGGAGT CGGCGCCCGG TACGGTGACC CAGGTCCGTG CCTCGGCGCA GGCGCTGATC
CGCTTCGCCA AGAAGACCGG CGCGGCGATC ATCCTGGTCG GCCACGTCAC CAAGGACGGC
CAGATCGCCG GCCCCCGCGT TGTCGAGCAC ATGGTTGACG CGGTGCTGTC GTTCGAAGGC
GAAGGCTCGC AGCAGTTCCG CATCCTGCGC TCGGTGAAGA ACCGCTTCGG CCCAACCGAT
GAGATCGGCG TGTTCGAAAT GACCGGCCTG GGCCTGCGCG AAGTCAGCAA CCCGTCGGAG
CTGTTTCTGT CCGAGCGCGA CCTCGGCTCG CCCGGCACCG CCGTATTTGC CGGCATCGAA
GGCACTCGCC CGGTGCTGGT GGAATTGCAG GCACTGGTGG CCCCCTCGAC GCTCGGCACC
CCGCGGCGCG CGGTGGTCGG ATGGGATTCG GCGCGGCTGT CGATGGTGCT GGCGGTGCTC
GAAGCGCATT GCGGCGTCAA GCTGAGTGGC TACGACGTCT ATTTCAATGT CGCCGGCGGC
CTGCGCATCA ACGAGCCCGC CGCCGACCTT GCCGCCGCTG CAGCCCTCGT ATCATCCCTA
GCGAACGCAC CGCTGCCGAC CGATGCGGTG TATTTCGGCG AGATTTCGCT GTCCGGCGCG
GTGCGCCCGG TCGCACAGAC CCCCGCGCGC CTCAAAGAGG CTGCCAAGCT CGGCTTTGCC
CGCGCGGTGC TGCCGGAACA GACCCGCGGC GAAACGCCTG CTGACGCCGG ATTGGCGCTG
CAATCGGTCG GCGGCCTGTC CAGTCTGGTG GCGGATATCG CCGCACGTGG CACGCGTCGG
GGCGACGACG ACGGTGCGCC GCGGACGAAA GCTGCCTCAA ATGCAACACC GGCGCGATTC
CGGCGCCAAG AAGCTTGA
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| Protein sequence | MAKASSSFVC QNCGAAFNRW QGKCEACGEW NTLVEEAGDN AVPVSIRAKR RGRTFKLESL
AGKSNDAPRL PSGMAELDRV TGGGFVRGSV LLVGGDPGIG KSTLLTQATS LMAKAGHRTV
YISGEEAIAQ VRLRAERLGL ASAPVELAAE TSVEDIVATL SEGATPKLIV IDSIQTMWTD
TVESAPGTVT QVRASAQALI RFAKKTGAAI ILVGHVTKDG QIAGPRVVEH MVDAVLSFEG
EGSQQFRILR SVKNRFGPTD EIGVFEMTGL GLREVSNPSE LFLSERDLGS PGTAVFAGIE
GTRPVLVELQ ALVAPSTLGT PRRAVVGWDS ARLSMVLAVL EAHCGVKLSG YDVYFNVAGG
LRINEPAADL AAAAALVSSL ANAPLPTDAV YFGEISLSGA VRPVAQTPAR LKEAAKLGFA
RAVLPEQTRG ETPADAGLAL QSVGGLSSLV ADIAARGTRR GDDDGAPRTK AASNATPARF
RRQEA
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