| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3492 |
|---|
| Symbol | |
|---|
| ID | 6411166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 3738533 |
|---|
| End bp | 3739783 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642713371 |
|---|
| Product | Cyclopropane-fatty-acyl-phospholipid synthase |
|---|
| Protein accession | YP_001992468 |
|---|
| Protein GI | 192291863 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGAG TATTTCGTCT CCTGCTCGGC CGCTTCATCC AACGCGGCAC CATCATTTTC
ACAACCGCAG GCGGCACCAC CTTCACCTGC GGCGACGGGA CCGGCGAACC AGTCCATGCG
CGGCTGACCT CGCCCCTCGC CCAGCGTCGC CTGCTGCTCG ATCCCGAGCT CGCGCTCGGC
GAGATCTACA TGGACGGAGG ACTAGTAATG CAGCAAGGCT CGATCGCCGA CCTGCTTGCG
GTCGCCATGG GCCAGCCCGA CTGGACTCCG CGCTGGGCCA AACTTCACGG CCTGGTGCGC
TACTGGATCC GGACCCTGCA CCAGTTCAAT CCGCGCAGCC GGTCGCGCAA CAACGTCGCT
CACCACTACG ACCTGGACGG CCGGCTCTAC GCGCTGTTTC TGGATTCCGA CAAGCAATAC
AGCTGCGCGT ATTTCGAGAC GCCCGACGCC AGTCTCGACG ACGCCCAGCT CGCCAAGAAG
CGCCACGTCG CAGCGAAGCT GTTGACCACG CCAGGACAAC GCGTGCTCGA CATCGGTTCA
GGCTGGGGCG GCTTGGGGCT GTATCTGGCT GAGACCTGCG GCGCGGATGT CACTGGGGTA
ACGCTGTCGC GGGAGCAGCT TCGGGCGGCC AACGCCCGCG CCGCCGAGCG GGGGCTTACC
GATCGAGCCC GCTTCCTGCT GCAGGACTAT CGCGATGTCT CCGGGCCGTT CAACCGTATC
GTCTCTATCG GCATGTTCGA GCATGTCGGT GTCGATCACT ATGAGACCTA CTTCCGCCGC
TGTGCCGAAT TGCTCACGGA CGACGGCGTG ATGCTGCTGC ATTCGATCGG CCGCTCCGAA
GGCCCCGGCT TCACCAATCC TTGGATCGCC AAATACATCT TCCCGGGCGG CTACCTGCCT
GCGCTCTCGG AGGTGCTGCC AGCCATCGAA CGCGCCGGGC TTCTGGTGTG CGACATCGAG
ATCCTGCGGC TGCACTACAC CGAGACGCTG AAAGCGTGGC GCGAGCGCTT CCTGGCGCAT
CAGGAAGAAG CCGAGCGGCT ATACGACGCG CGGTTCGTCA GGATGTGGGA GTTCTATCTG
GCTGCGTCGG AGATGTCGTT TCGGAAGCAG AACACGATGG TGTTCCAGAT CCAGCTCGCC
CGGCGCCAAG GGGTGGTGCC GATCACGCGC GACTATATTG CGGCAGAGGA GAAACGGCTG
CGCGGCATGG AAAAGAGCCG CAAGCCGCGG ATGCAACTCG CCGGCGAATG A
|
|---|
| Protein sequence | MDGVFRLLLG RFIQRGTIIF TTAGGTTFTC GDGTGEPVHA RLTSPLAQRR LLLDPELALG
EIYMDGGLVM QQGSIADLLA VAMGQPDWTP RWAKLHGLVR YWIRTLHQFN PRSRSRNNVA
HHYDLDGRLY ALFLDSDKQY SCAYFETPDA SLDDAQLAKK RHVAAKLLTT PGQRVLDIGS
GWGGLGLYLA ETCGADVTGV TLSREQLRAA NARAAERGLT DRARFLLQDY RDVSGPFNRI
VSIGMFEHVG VDHYETYFRR CAELLTDDGV MLLHSIGRSE GPGFTNPWIA KYIFPGGYLP
ALSEVLPAIE RAGLLVCDIE ILRLHYTETL KAWRERFLAH QEEAERLYDA RFVRMWEFYL
AASEMSFRKQ NTMVFQIQLA RRQGVVPITR DYIAAEEKRL RGMEKSRKPR MQLAGE
|
|---|
| |