Gene Rpal_3487 details

Gene Information

• Locus tag: Rpal_3487
• Symbol: rpsF
• ID: 6411161
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 3734716
• End bp: 3735192
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642713366
• Product: 30S ribosomal protein S6
• Protein accession: YP_001992463
• Protein GI: 192291858
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0360] Ribosomal protein S6
• TIGRFAM ID: [TIGR00166] ribosomal protein S6

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.289777
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTCTTT ATGAGCATGT CTTTTTGGCG CGCCAGGATG CCAGCGCCCA GCAGGTTGAA 
GAGCTCACCA CCCAGATCAC CGGCGTGATC GAAGGTCTCG GCGGCAAGGT CACCAAGACC 
GAGTCGTGGG GCCTGCGCTC CCTGACCTAC CGCATGAACA AGAACCGCAA GGCGCATTTC 
GTGCTGCTGA ACATCGACGG CCCCGCCGCG GTGGTCTCGG AGATCGAGCG CCAGGAGCGG 
ATCAACGAAG ACGTCATCCG TTATCTGACG GTGCGCGTCG ACGAACACGA GGAAGGCCCC 
TCGGCGATGA TGCGCAAGGC CGATCGGGAT CGCGAACGCG ACGACCGTGG CCCCCGCGAA 
GGTGGCTTCC GCGGTGATCG CGAAGGCCGT GGCGACCGCG ACGGTTTCCG TGGCGATCGT 
GGTCCGCGCC GTCCGCGTGA AGACGCCGAC GCCCCCGCAG CAGCAGTCGA GGAGTAA 

 

Protein sequence

MPLYEHVFLA RQDASAQQVE ELTTQITGVI EGLGGKVTKT ESWGLRSLTY RMNKNRKAHF 
VLLNIDGPAA VVSEIERQER INEDVIRYLT VRVDEHEEGP SAMMRKADRD RERDDRGPRE 
GGFRGDREGR GDRDGFRGDR GPRRPREDAD APAAAVEE