Gene Rpal_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3479 
Symbolgmk 
ID6411153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp3726193 
End bp3726855 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID642713358 
Productguanylate kinase 
Protein accessionYP_001992455 
Protein GI192291850 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG GAGCGGCGGG CAGCTACAGC GGTGTCGAGC GGCGCGGGCT GATGTTCGTG 
CTGTCGTCGC CCTCCGGCGC CGGCAAGACG ACGCTGTCGC GGATGCTGGT CGAGCAGATG 
CCAGGGCTGC AGATGTCGGT GTCAGCGACG ACACGGCCGA TGCGGCCTGG CGAGGTCGAC 
GGCCGCGACT ATTACTTTGT CGATCGGCCG AAATTCGACG AGATGGTCGG CGCCGGGGAA 
TTCCTCGAAT GGGCCAACGT GTTCGACAAT CGCTATGGCA CGCCGCGTGC CCCGGTCGAA 
GCCGCGCTCG CAGCCGGCCG CGATGTGTTG TTTGATATCG ACTGGCAGGG CACACAGCAG 
CTCCGCAGTC GCGCTGGAAG CGACGTCGTC AGCGTCTTCA TCCTGCCGCC GTCCGTGCAG 
GCGCTGGAGC ATCGGCTGCA TACCCGCGCG CAGGATTCCC ACGAGGTGAT CCGCGGTCGG 
ATGAAGAAGG CCGGCGACGA GATGAGCCAC TTCGACGCCT ACGATTACAT CGTGGTCAAC 
GACAATATCG GCGTTGCCTT CGAGTCCGTG CGTTCGATCC TGCGCGCCGA GCAGCTCAAG 
CGCGAGCGCC AGGTCGGATT GGACGCCTTC GTCCGCGGGA TGCGCCAGCA GCTCGAAGGC 
TGA
 
Protein sequence
MSDGAAGSYS GVERRGLMFV LSSPSGAGKT TLSRMLVEQM PGLQMSVSAT TRPMRPGEVD 
GRDYYFVDRP KFDEMVGAGE FLEWANVFDN RYGTPRAPVE AALAAGRDVL FDIDWQGTQQ 
LRSRAGSDVV SVFILPPSVQ ALEHRLHTRA QDSHEVIRGR MKKAGDEMSH FDAYDYIVVN 
DNIGVAFESV RSILRAEQLK RERQVGLDAF VRGMRQQLEG