Gene Rpal_3477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3477 
Symbol 
ID6411151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3723794 
End bp3724852 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content63% 
IMG OID642713356 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_001992453 
Protein GI192291848 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAA TGCGTCGCCA GTCTCTGGTG AAATTCGACG CCCCGCTTTG TGAGACCATC 
ATCGATGCGC CGAAGCCGCA GGGGCGCGAA GTGCTGGTGA AGATCGAGCG CTGCGGCCTG
TGCCACTCCG ACCTGCACAT TCAGGACGGC TACGCCGATC TCGGCGGCGG CAAGAAGCTC
GATACCACGC GCGGCATGAC GCTGCCGTTC ACCCTGGGTC ATGAGATCGC CGGCGTCGTC
GCCGAAGTCG GTCCCGACGC TCCGCAGGAT CTGATCGGGA CCAAGAAAGC GGTGTTTCCT
TGGATCGGCT GCGGCAAATG CCGTGATTGC CTCGCGGGCG ACGAGAACCT GTGCGCCAAG
AACCGCTTCC TCGGCGTCTC GATCGACGGC GGCTTCGCGA CCCACGTACT GGTGCCGGAC
GCCAAGTATC TGCTCGACTA CGATCCGCTG CCGACCAACG TCGCTGCGAC GTTGATGTGC
TCTGGTATCA CCGCCTATGG CGCCTTGAAG CGTCTGGTGG ACCGGCCTCG TCAGCGCAAT
CTGCTGCTGA TCGGTCTAGG CGGCGTCGGC ATGATGGGTC TCTCGCTTGC TCAGGCGATG
TTCAAGCAGC CGATCGCGGT GGCCGATCTC AGCCCCGCGG CGCGCGAAGC GGCGCTGAAG
AACGGCGCGG CCGTCGCTTA CGATCCATCG GAGCCCGACG TTGCCAAGCG CATCTTCAAG
GAGACCGATG GCGGCTTCGA TGGCGTGGTG GATTTCGCCG GCAACGATAA GTCGATGAAC
TTCGCCGTCA GCACGGTTGC GCGTGGTGGC AAGATCGTGG TGTCGGGTCT GATGGGCGGC
CAGTTCAGCC TGCCGATGGT GCAATGGATC TACAAGCGCA TGACCGTCGA AGGCTTCATG
GTCGGCACGC TCGAAGAGAC CAAGGAGCTG CTCGCGCTCG CGCGTGCCGG CAAGGTCAAG
CCGACTCCGA TGAAGGAAGA GCCGATGCAG GATGCGCAAA AGTGGATCGA TCAGCTGCGT
GCCGGCAAGG TCGTTGGCCG CATCATGCTG GCGAACTAA
 
Protein sequence
MTQMRRQSLV KFDAPLCETI IDAPKPQGRE VLVKIERCGL CHSDLHIQDG YADLGGGKKL 
DTTRGMTLPF TLGHEIAGVV AEVGPDAPQD LIGTKKAVFP WIGCGKCRDC LAGDENLCAK
NRFLGVSIDG GFATHVLVPD AKYLLDYDPL PTNVAATLMC SGITAYGALK RLVDRPRQRN
LLLIGLGGVG MMGLSLAQAM FKQPIAVADL SPAAREAALK NGAAVAYDPS EPDVAKRIFK
ETDGGFDGVV DFAGNDKSMN FAVSTVARGG KIVVSGLMGG QFSLPMVQWI YKRMTVEGFM
VGTLEETKEL LALARAGKVK PTPMKEEPMQ DAQKWIDQLR AGKVVGRIML AN