Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3470 |
Symbol | |
ID | 6411144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3714149 |
End bp | 3715651 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642713349 |
Product | leucyl aminopeptidase |
Protein accession | YP_001992446 |
Protein GI | 192291841 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0260] Leucyl aminopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.987898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCGACG CCGTCAAGGT CGGTTTCGTC CCGTTTGCTA CGCCCGCGCG CGGCACGCTG ATCGTGTTCT GCGACGACGG TCTGAAGTTC GGCGCGACGG CGACCAAGGC CTTGGGCGCG GCGGTCGCCA CCGTCAAGCG CGCAGCCGCG ACCGCGCAGT TCAAGGGCAA GTCCGGTTCC GCGATGGACC TGTTGGCCCC TGAGGGCCTC AAGGTTGGCC GCCTGATCGT CGTCGGCGCC GGCAAGGTCG CGTCGATCAA CGATTACGAT CTGCTCAAGC TCGGCGGCGC CGTTGCCGGC AAGATCGGCG CGGGCGATAC GGCGGTGACG GTGGTTGCCG ATCTGCCGAC CGGCGCGATG AAGCCCGAGC AGGCGGCCGC GATCGCCTCC GGCATCCGGC TGCGCGCCTA CAAGTTCGAT CGCTACAAGA CCAAGAAGAA GGACGACGAG AACGGCGCGG CGAATGCCAG CGTCACGCTC GCAGTGGCCG ATCCGGCGGC AGCCAAGAAG GCGTTCACGC CCGACAGCCA CGTCGTCGAC GGCGTCATCC TGGCGCGCGA GCTCGTCAAC GAGCCGCCGA ACGTGCTGTA CCCGGAAGAG TTCGCCAAGC GGGCGGCGCA GCTCAAGAAG CTCGGCGTCG AGGTTCAGAT CCTCGACGTC AAGGCGATGA CCCAGCTGAA GATGGGCGCG CTGCTCGGCG TGTCGCAGGG CTCGGCGCAT CCGGGACGCA CCGTGATCAT GCGCTGGAAC GGCGGCAAGA AGGGCGAGCA GCCGCTTGCC TTCGTCGGCA AGGGCGTGTG CTTCGACACC GGCGGCATCT CGATCAAGCC GTCGGCCAGC ATGGAAGACA TGAAGGGCGA CATGGGCGGC GCGGCCTGCG TCGTCGGCCT GATGCATGCG CTCGCGGCTC GTAAGGCCAA GGTCAATGCG GTCGGCGCGA TCGGTCTGGT CGAAAACATG CCGGACGGCA ACGCGCAGCG GCCGGGTGAC ATCGTCACTT CGATGTCGGG CCAGACCATC GAGATCATCA ACACCGACGC CGAGGGCCGT TTGGTGCTGG CCGATGTGCT TTGGTACGTG GCGCAGAAGC ACAAGCCGAA GTTCATGGTC GACCTGGCGA CGCTGACCGG TGCCATCATG GTGGCGCTCG GCACCGAATA TGCCGGCCTG TTCTCCAACA ACGATCAGCT CGCGGAGCGG CTGGCTGCCG TTGGTCAGTC CACCGGCGAG AAGGTTTGGC GGATGCCGCT CGGCCCGGAA TACGACAAGC AGATCGACTC CCAGTTCGCC GATATGAAGA ACACCGGGTC GCGCAACGGC GGTTCGATCA CCGCGGCGCA GTTCCTGCAG CGCTTCGTCG ACGGCACGCC GTGGGCGCAT CTCGACATCG CCGGCACTGC GATGGCCTCG CCGAAGAACG AGATCAATCA GAGCTGGGGC TCGGGATACG GCGTCCGACT GCTCAATCAG CTCGTGGCGG AGTACTACGA AGCCAAGAAG TAA
|
Protein sequence | MPDAVKVGFV PFATPARGTL IVFCDDGLKF GATATKALGA AVATVKRAAA TAQFKGKSGS AMDLLAPEGL KVGRLIVVGA GKVASINDYD LLKLGGAVAG KIGAGDTAVT VVADLPTGAM KPEQAAAIAS GIRLRAYKFD RYKTKKKDDE NGAANASVTL AVADPAAAKK AFTPDSHVVD GVILARELVN EPPNVLYPEE FAKRAAQLKK LGVEVQILDV KAMTQLKMGA LLGVSQGSAH PGRTVIMRWN GGKKGEQPLA FVGKGVCFDT GGISIKPSAS MEDMKGDMGG AACVVGLMHA LAARKAKVNA VGAIGLVENM PDGNAQRPGD IVTSMSGQTI EIINTDAEGR LVLADVLWYV AQKHKPKFMV DLATLTGAIM VALGTEYAGL FSNNDQLAER LAAVGQSTGE KVWRMPLGPE YDKQIDSQFA DMKNTGSRNG GSITAAQFLQ RFVDGTPWAH LDIAGTAMAS PKNEINQSWG SGYGVRLLNQ LVAEYYEAKK
|
| |