| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3466 |
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| Symbol | ndk |
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| ID | 6411140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3710566 |
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| End bp | 3710988 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713345 |
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| Product | nucleoside diphosphate kinase |
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| Protein accession | YP_001992442 |
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| Protein GI | 192291837 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0105] Nucleoside diphosphate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.157142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGATCG AACGGACTTT CTCGATTCTC AAGCCCGATG CGACCGAGCG CAACATCACT
GGCGCGATCA ACGCGCTGAT CGAAAAGGCC GGTCTGCGGA TCGTCGCCCA GAAGCGCATC
CGCATGACCC GCGACCAGGC CGAGACCTTC TACGCCGTGC ACAAGGAACG CCCGTTCTTC
GGCGAACTGG TCGACTTCAT GATCTCCGGC CCGGTGGTGG TTCAGGTGCT CGAAGGCGAG
GGCGCGATCG CGAAGTACCG CGACGTGATG GGCGCGACCG ATCCGTCGAA GGCGGCTGAC
GGCACCATCC GCAAGCTGCA CGCCAAGTCG ATCGGCGAGA ACTCGGTGCA CGGTTCGGAC
GCGGCGGAAA CCGCCAAGAT CGAGATCGCC CAGTTCTTCT CCGGCAACGA AATCGTCGGA
TAA
|
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| Protein sequence | MAIERTFSIL KPDATERNIT GAINALIEKA GLRIVAQKRI RMTRDQAETF YAVHKERPFF
GELVDFMISG PVVVQVLEGE GAIAKYRDVM GATDPSKAAD GTIRKLHAKS IGENSVHGSD
AAETAKIEIA QFFSGNEIVG
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