Gene Rpal_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3459 
Symbol 
ID6411133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp3704788 
End bp3705465 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content67% 
IMG OID642713338 
Producthypothetical protein 
Protein accessionYP_001992435 
Protein GI192291830 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.342495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAGTTC GCGTTGAACC TCGACAATTA GCCCTCGACC TGCCGCATGC CGAAAGCCTG 
TCGCGCGAGG ATTTTCTGGA AGGTTCGGCC AACACCGCGG CGCTGTCTCT GATCGAGAGC 
TGGCCGGACT GGCCCAACCG TATCATGATG CTGGTTGGCC CCGAGGGCAG CGGCAAGAGT 
CACCTGGCGG CGATCTGGGC CGAACTGGCA GGCGCGCGGT CGACCGCGGC GCAGGCGCTG 
AATGCCGCGT CGGTGCCCGG CGCGCTGGCG ACCGGCGCGG TGGTGGTCGA AGATCTGGTG 
CCGGGCAGTT TCGACGAGCG GGCGCTCTTC CACCTGATGA ACATGGCGCG GGAAGACGAA 
GCCTATGTGC TGTTCACCGG CCGGGTCGAG CCATCGGCCT TATCGATCGA CCTGCGCGAC 
CTGAAGTCGC GGCTGCGAAC CGTGCCGGTG GTGTCATTGC TGCCGCCAGA CGATGCCCTG 
TTTCGGGCTC TGATCGTCAA ATTCTGCGCC GACCGCCAGA TGTGCATCGA CGCCGCGCTG 
GTCGGCTACC TCGCCAACCG GATCGACCGG TCGTTCGTGG CCGCTCGCCA GGTGGTGGAA 
AAGCTCGACA CGACGGCGCT GCGGCTCGGC CGCCCGGTGA CCCGGGCGCT CGCCTCAGAA 
GTGCTGCGCG CCGACTAG
 
Protein sequence
MPVRVEPRQL ALDLPHAESL SREDFLEGSA NTAALSLIES WPDWPNRIMM LVGPEGSGKS 
HLAAIWAELA GARSTAAQAL NAASVPGALA TGAVVVEDLV PGSFDERALF HLMNMAREDE 
AYVLFTGRVE PSALSIDLRD LKSRLRTVPV VSLLPPDDAL FRALIVKFCA DRQMCIDAAL 
VGYLANRIDR SFVAARQVVE KLDTTALRLG RPVTRALASE VLRAD