Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3447 |
Symbol | |
ID | 6411121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3688200 |
End bp | 3688748 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642713326 |
Product | CreA family protein |
Protein accession | YP_001992423 |
Protein GI | 192291818 |
COG category | [S] Function unknown |
COG ID | [COG3045] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCGGC GTGCCTCTCA GTTTCGCCTC TCCCGCTTCA AATCCGCGAC CCTGGCGCTG CTTGCGCTGG CTGTGACGGG CGCTTCCACC GCTGCCGTGG CCGCCGACGA TCCGGATCTG ATCTTCCGAC GCTCGACGGT GTTCAAGCTG CTGAGCCCCA ACGACAAGCT CGCCGTGTAC GGCATCGACG ATCCGGAGAT CAAAGGCGTC GCCTGCCACT TCACGGTGCC GGAGCGCGGT GGGTTCAAAG GATGGCTCGG TTTGGCCGAG GAGGTCTCCG ACATTTCGCT GGCGTGCCGC CAGGTCGGAC CGATCCACTT TACCAAGAAG CTCGATCAGG GCGACGACAT GTTCAGCCAG CGCCGCTCGA TGTTCTTCAA GCGGATGCAG ATCGTCCGCG GCTGCGACGC CAAGCGAAAC GTGCTGGTTT ACATGGTGTA TTCGGACAGG CTGATCGAAG GCTCGCCGAA GAACTCGACG TCGTCGGTGC CGGTGATGCC GTGGGGCGGG GATACCGCGG TCGAGAAATG CGGGGACTTC ATCAAGTAA
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Protein sequence | MNRRASQFRL SRFKSATLAL LALAVTGAST AAVAADDPDL IFRRSTVFKL LSPNDKLAVY GIDDPEIKGV ACHFTVPERG GFKGWLGLAE EVSDISLACR QVGPIHFTKK LDQGDDMFSQ RRSMFFKRMQ IVRGCDAKRN VLVYMVYSDR LIEGSPKNST SSVPVMPWGG DTAVEKCGDF IK
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