Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3441 |
Symbol | |
ID | 6411115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3684294 |
End bp | 3684692 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642713320 |
Product | thioesterase superfamily protein |
Protein accession | YP_001992417 |
Protein GI | 192291812 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.592897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCGC TGGAGAAGAT CAATTCAATT CCGTTGCCGT TCGCGGCGCT GATGGGGCTG CGCTTCACCG AAGCCGAACC CGACCGTGTC GTCGCTACGC TGCTGGTGCG CGATGATCTC TGCACCGTCG GCGCGAGCAT TCATGGCGGT GCTGTGATGG CGCTGGCCGA CAGTGTCGGC GCGGCGGCGA CCGTGATCAA TCTGCCCGCC GATGCCAAGG GCACCACGAC GCTGGAGAGC AAGACCAACT TCATCGGTCC GGCGAAAGCT GGCTCGACCG TGGTGGCGAC TGCCACGCCG GTGCATCGCG GACGGCGGAC CCAGGTGTGG CAGACCCGAA TCGAGACCGA GGACGGCAAA CTAGTGGCGG TGGTTACCCA GACGCAGATG GTGCTATGA
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Protein sequence | MTPLEKINSI PLPFAALMGL RFTEAEPDRV VATLLVRDDL CTVGASIHGG AVMALADSVG AAATVINLPA DAKGTTTLES KTNFIGPAKA GSTVVATATP VHRGRRTQVW QTRIETEDGK LVAVVTQTQM VL
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