Gene Rpal_3441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3441 
Symbol 
ID6411115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3684294 
End bp3684692 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content65% 
IMG OID642713320 
Productthioesterase superfamily protein 
Protein accessionYP_001992417 
Protein GI192291812 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.592897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCGC TGGAGAAGAT CAATTCAATT CCGTTGCCGT TCGCGGCGCT GATGGGGCTG 
CGCTTCACCG AAGCCGAACC CGACCGTGTC GTCGCTACGC TGCTGGTGCG CGATGATCTC
TGCACCGTCG GCGCGAGCAT TCATGGCGGT GCTGTGATGG CGCTGGCCGA CAGTGTCGGC
GCGGCGGCGA CCGTGATCAA TCTGCCCGCC GATGCCAAGG GCACCACGAC GCTGGAGAGC
AAGACCAACT TCATCGGTCC GGCGAAAGCT GGCTCGACCG TGGTGGCGAC TGCCACGCCG
GTGCATCGCG GACGGCGGAC CCAGGTGTGG CAGACCCGAA TCGAGACCGA GGACGGCAAA
CTAGTGGCGG TGGTTACCCA GACGCAGATG GTGCTATGA
 
Protein sequence
MTPLEKINSI PLPFAALMGL RFTEAEPDRV VATLLVRDDL CTVGASIHGG AVMALADSVG 
AAATVINLPA DAKGTTTLES KTNFIGPAKA GSTVVATATP VHRGRRTQVW QTRIETEDGK
LVAVVTQTQM VL