| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3437 |
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| Symbol | |
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| ID | 6411111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3681533 |
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| End bp | 3682369 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713316 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_001992413 |
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| Protein GI | 192291808 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.544933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACGA GATCGTGGGC CGCCGGCGGA TCGGCTGTCC TGCTCGCGCT GTTACTTGGG
GGCGCGATCA CCTCCGCACA TGCGCAGTCG GCCGATCTGG TGTTATGCGA TCGGATTGCT
GCTGATCCGG CAGATCCCGA CAAGCCGGCC GATGTGAAAG GCGTGACCGA GATTGCGCCC
GGCGACGTTG CCACCGCGAT CAAATACTGC CGCGTCGCCT CGGCCGGATC GCGCCGGGCG
ATGTACGGGC TTGGCCGTGC CTATGCGGCC GGTGGCCAGA CCGCCGAGGC GCTGGCTGCT
TACCGCAAGG CCGCGGACAA GGGATCGAGC GCGGCCATGG TCGAACTTGG CGTTGCTTAT
GCGACCGGCG CCGGCCTGAC GAAAGATGAC GGCAAAGCTC GGCAGCTCCT GGAGCGTGCC
GCGGCCGCCG GCAATCCGCG CGGCATCAGC AATCTCGCCG CGCTCGGCGG TGGGGCGTCG
TCCGACCCCG TGAAAACCCG AGCCTTGCTT GCCAAGGGCG CGGAGAGTAA CGCCGAGGCG
CAATATCAGC TCGGCATGAT GATGGCCGAC GGTATCGGCG GTCCGAAAGA CGACGCCGGC
GCGCGAGCTC TGTTTGAAAA GGCGGCGGGG CAGGGCCACC CCGGCGCCTT GATGCAGATG
GGGGCGTTTG CCCAAGCGGG TCGAGGCGGC CCGAAGGACA GTGACGCTGC CAAGGCATAC
TACGAAAAGG CTGCCGCGCT CGGCAACGCC GACGCCAAGG CGGCGCTGAA GCGGAGCGAT
TGCCCCTATG TGCTTAAGGA CAAGCGCGGA AACATGGTGA CAAACCTATG CTTCTAG
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| Protein sequence | MMTRSWAAGG SAVLLALLLG GAITSAHAQS ADLVLCDRIA ADPADPDKPA DVKGVTEIAP
GDVATAIKYC RVASAGSRRA MYGLGRAYAA GGQTAEALAA YRKAADKGSS AAMVELGVAY
ATGAGLTKDD GKARQLLERA AAAGNPRGIS NLAALGGGAS SDPVKTRALL AKGAESNAEA
QYQLGMMMAD GIGGPKDDAG ARALFEKAAG QGHPGALMQM GAFAQAGRGG PKDSDAAKAY
YEKAAALGNA DAKAALKRSD CPYVLKDKRG NMVTNLCF
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