Gene Rpal_3436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3436 
Symbol 
ID6411110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3679410 
End bp3681272 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content64% 
IMG OID642713315 
ProductK potassium transporter 
Protein accessionYP_001992412 
Protein GI192291807 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.122338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGC AGAAGAAGGG CATCGGTCTC CTGGTCAGTG CCATCGGAGT CGTGTTCGGC 
GACATCGGCA CCAGCCCGCT TTACGCCCTG AAGGAAACTT TCGCCGGTCA CCACCCGATT
CCGGTGACGC CGGACAACAT CTTCGGCGTG CTGTCGCTGG TGTTCTGGAC CGTGATGCTG
CTGGTGACGG TGAAGTACGT CATCGTCATC ATGCGCGCCG ACAACCACGG CGAGGGCGGC
AGCCTCGCGC TGCTGGCGCT GGTGACCGAA CTGACGCGCG GCCGGCGCGT GCATTATCCG
CTGATGATGC TGGGCGTGAT CGCCGCTGCG CTGTTCTACG GCGACAGCAT GATTACGCCG
GCGATCTCGG TGCTCAGCGC CGTGGAAGGC CTGGAAGTCG TCACGCCGGA TCTCAAGGCC
TATGTGGTGC CGATCACGGC GGTGGTGCTG ACGTTGTTAT TCGCGATCCA GTCGCGCGGC
ACCGGTCTGG TCGGGCGGCT GTTCGGCCCC GTCATGTGCA TGTGGTTCCT GACGCTGGCT
TTGCTCGGGA TCGCCAACAT CGTGCATGCA CCCGAAGTGC TCGAGGCGAT CAGCCCGACC
TTCGCGATCG AATTCGTATT CCGCCATCCG CTGATGAGCT TCTACGCACT CGGCTCGGTG
GTGCTCGCCG TCACCGGCGG TGAGGCGCTG TACACAGACA TGGGCCACTT CGGCCGCTTC
CCGATCCGGC TGGCGTGGTT CGGCCTGGTA CTGCCGGCGC TGCTGCTGAA CTATTTCGGT
CAGGGTGCGC TGCTGATCCA CGATCCGAGC GCGATCCAGA ACCCGTTCTT CCGGCTCGGG
CCGGAATGGA TGGTGGTGCC GATGGTCGCG CTCGCGACGC TCGCCACGGT GATCGCGTCG
CAGGCGGTGA TCTCCGGCGC CTACTCGGTG GCGCGGCAGG CGATCCAGCT CGGCCTGCTG
CCCCGGATGA CGATCGTCCA CACTTCTGGC GAGGAGGCCG GCCAGATCTA CGTGCCGTTC
ACCAACTGGA CGCTGTACTT TGCGGTGATG GCGCTGGTGG TGGGCTTCCA GTCGTCGAGC
AACCTGGCCG CGGCTTACGG CATCGCGGTG ACCGGCACGA TGATGATCGA CACCATCCTG
GTGTCGTTCG TCGCCGCATT GCTGTGGCGG TGGCACCCGG TCGTGGTCGC GGTGGTGATC
GGCACGCTGC TGCTGCTCGA CTTCGCGTTC TTCGCCGCCA ACATCATCAA GGTCGCGCAG
GGCGGCTGGT TTCCGCTGTT CATCGGCTTC ATCTCGTTCA CGGTACTGAC GACCTGGCGT
CGTGGGCGGG CGCTGGTGCG CAAACAGCTG AAGAAGCAGG CGGTGCCGCT CGACGTGGTG
TTGCGGGCAC TGGGACCGAA CGTGTCGCGC GCGCGCGGTA CGGCGGTGTT TCTCACCGCT
GCGACCGACG GCGTGCCGCC GGCGCTGCTC CACAATCTGA AGCACAATCA GACGGTCCAT
CAGCGCGTCA TTCTGACCAC GGTGAGTACC GCCGAAACGC CGTATGTGCC GGACAGCGAG
CGCGTGCACA TGACGGATAT CGGCGACGGC TTCCATCGCC TGATCATCCG CTACGGCTTC
ATGCAGACGC CGGACGTGCC GGCTGCGCTG TCGCTGTGCA AACAGTTCGG ACACGAGTTC
AACATGATGT CGACCTCGTT CTTCCTCAGC CGCGAAACCT ATGTGCCGAG CCTCAATCCA
GGCATGGCGC TGTGGCGCGA GCGGCTGTTC ACCTTCATGA CGCTGAACGC GACGCGGGCG
ACGACCTTCT TCAAGATTCC GACCGACCGC GTGGTCGAAC TCGGGACGCA GCTCGAGATT
TGA
 
Protein sequence
MSQQKKGIGL LVSAIGVVFG DIGTSPLYAL KETFAGHHPI PVTPDNIFGV LSLVFWTVML 
LVTVKYVIVI MRADNHGEGG SLALLALVTE LTRGRRVHYP LMMLGVIAAA LFYGDSMITP
AISVLSAVEG LEVVTPDLKA YVVPITAVVL TLLFAIQSRG TGLVGRLFGP VMCMWFLTLA
LLGIANIVHA PEVLEAISPT FAIEFVFRHP LMSFYALGSV VLAVTGGEAL YTDMGHFGRF
PIRLAWFGLV LPALLLNYFG QGALLIHDPS AIQNPFFRLG PEWMVVPMVA LATLATVIAS
QAVISGAYSV ARQAIQLGLL PRMTIVHTSG EEAGQIYVPF TNWTLYFAVM ALVVGFQSSS
NLAAAYGIAV TGTMMIDTIL VSFVAALLWR WHPVVVAVVI GTLLLLDFAF FAANIIKVAQ
GGWFPLFIGF ISFTVLTTWR RGRALVRKQL KKQAVPLDVV LRALGPNVSR ARGTAVFLTA
ATDGVPPALL HNLKHNQTVH QRVILTTVST AETPYVPDSE RVHMTDIGDG FHRLIIRYGF
MQTPDVPAAL SLCKQFGHEF NMMSTSFFLS RETYVPSLNP GMALWRERLF TFMTLNATRA
TTFFKIPTDR VVELGTQLEI