Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3436 |
Symbol | |
ID | 6411110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3679410 |
End bp | 3681272 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642713315 |
Product | K potassium transporter |
Protein accession | YP_001992412 |
Protein GI | 192291807 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3158] K+ transporter |
TIGRFAM ID | [TIGR00794] potassium uptake protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.122338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGC AGAAGAAGGG CATCGGTCTC CTGGTCAGTG CCATCGGAGT CGTGTTCGGC GACATCGGCA CCAGCCCGCT TTACGCCCTG AAGGAAACTT TCGCCGGTCA CCACCCGATT CCGGTGACGC CGGACAACAT CTTCGGCGTG CTGTCGCTGG TGTTCTGGAC CGTGATGCTG CTGGTGACGG TGAAGTACGT CATCGTCATC ATGCGCGCCG ACAACCACGG CGAGGGCGGC AGCCTCGCGC TGCTGGCGCT GGTGACCGAA CTGACGCGCG GCCGGCGCGT GCATTATCCG CTGATGATGC TGGGCGTGAT CGCCGCTGCG CTGTTCTACG GCGACAGCAT GATTACGCCG GCGATCTCGG TGCTCAGCGC CGTGGAAGGC CTGGAAGTCG TCACGCCGGA TCTCAAGGCC TATGTGGTGC CGATCACGGC GGTGGTGCTG ACGTTGTTAT TCGCGATCCA GTCGCGCGGC ACCGGTCTGG TCGGGCGGCT GTTCGGCCCC GTCATGTGCA TGTGGTTCCT GACGCTGGCT TTGCTCGGGA TCGCCAACAT CGTGCATGCA CCCGAAGTGC TCGAGGCGAT CAGCCCGACC TTCGCGATCG AATTCGTATT CCGCCATCCG CTGATGAGCT TCTACGCACT CGGCTCGGTG GTGCTCGCCG TCACCGGCGG TGAGGCGCTG TACACAGACA TGGGCCACTT CGGCCGCTTC CCGATCCGGC TGGCGTGGTT CGGCCTGGTA CTGCCGGCGC TGCTGCTGAA CTATTTCGGT CAGGGTGCGC TGCTGATCCA CGATCCGAGC GCGATCCAGA ACCCGTTCTT CCGGCTCGGG CCGGAATGGA TGGTGGTGCC GATGGTCGCG CTCGCGACGC TCGCCACGGT GATCGCGTCG CAGGCGGTGA TCTCCGGCGC CTACTCGGTG GCGCGGCAGG CGATCCAGCT CGGCCTGCTG CCCCGGATGA CGATCGTCCA CACTTCTGGC GAGGAGGCCG GCCAGATCTA CGTGCCGTTC ACCAACTGGA CGCTGTACTT TGCGGTGATG GCGCTGGTGG TGGGCTTCCA GTCGTCGAGC AACCTGGCCG CGGCTTACGG CATCGCGGTG ACCGGCACGA TGATGATCGA CACCATCCTG GTGTCGTTCG TCGCCGCATT GCTGTGGCGG TGGCACCCGG TCGTGGTCGC GGTGGTGATC GGCACGCTGC TGCTGCTCGA CTTCGCGTTC TTCGCCGCCA ACATCATCAA GGTCGCGCAG GGCGGCTGGT TTCCGCTGTT CATCGGCTTC ATCTCGTTCA CGGTACTGAC GACCTGGCGT CGTGGGCGGG CGCTGGTGCG CAAACAGCTG AAGAAGCAGG CGGTGCCGCT CGACGTGGTG TTGCGGGCAC TGGGACCGAA CGTGTCGCGC GCGCGCGGTA CGGCGGTGTT TCTCACCGCT GCGACCGACG GCGTGCCGCC GGCGCTGCTC CACAATCTGA AGCACAATCA GACGGTCCAT CAGCGCGTCA TTCTGACCAC GGTGAGTACC GCCGAAACGC CGTATGTGCC GGACAGCGAG CGCGTGCACA TGACGGATAT CGGCGACGGC TTCCATCGCC TGATCATCCG CTACGGCTTC ATGCAGACGC CGGACGTGCC GGCTGCGCTG TCGCTGTGCA AACAGTTCGG ACACGAGTTC AACATGATGT CGACCTCGTT CTTCCTCAGC CGCGAAACCT ATGTGCCGAG CCTCAATCCA GGCATGGCGC TGTGGCGCGA GCGGCTGTTC ACCTTCATGA CGCTGAACGC GACGCGGGCG ACGACCTTCT TCAAGATTCC GACCGACCGC GTGGTCGAAC TCGGGACGCA GCTCGAGATT TGA
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Protein sequence | MSQQKKGIGL LVSAIGVVFG DIGTSPLYAL KETFAGHHPI PVTPDNIFGV LSLVFWTVML LVTVKYVIVI MRADNHGEGG SLALLALVTE LTRGRRVHYP LMMLGVIAAA LFYGDSMITP AISVLSAVEG LEVVTPDLKA YVVPITAVVL TLLFAIQSRG TGLVGRLFGP VMCMWFLTLA LLGIANIVHA PEVLEAISPT FAIEFVFRHP LMSFYALGSV VLAVTGGEAL YTDMGHFGRF PIRLAWFGLV LPALLLNYFG QGALLIHDPS AIQNPFFRLG PEWMVVPMVA LATLATVIAS QAVISGAYSV ARQAIQLGLL PRMTIVHTSG EEAGQIYVPF TNWTLYFAVM ALVVGFQSSS NLAAAYGIAV TGTMMIDTIL VSFVAALLWR WHPVVVAVVI GTLLLLDFAF FAANIIKVAQ GGWFPLFIGF ISFTVLTTWR RGRALVRKQL KKQAVPLDVV LRALGPNVSR ARGTAVFLTA ATDGVPPALL HNLKHNQTVH QRVILTTVST AETPYVPDSE RVHMTDIGDG FHRLIIRYGF MQTPDVPAAL SLCKQFGHEF NMMSTSFFLS RETYVPSLNP GMALWRERLF TFMTLNATRA TTFFKIPTDR VVELGTQLEI
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