Gene Rpal_3430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3430 
Symbol 
ID6411104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp3674806 
End bp3675393 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content68% 
IMG OID642713310 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001992407 
Protein GI192291802 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.842575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATGG GCCGCCCCCG CGAATTCGAT GTCGATGCGG CGCTCGACCT CGCTTTGCAT 
GTGTTCTGGC GCAAGGGGTA CGAAGGCACC TCGATGGCGG ACCTCACCGA GGCGATGGGT 
ATCACCAAGC CGAGCCTGTA TGCGGCGTTC GGCAACAAGG AAGAGCTGTT TCGCAAGGCG 
CTGGACCGCT ACGTCGACGG CCCCGGCGGC TACTACCAGG CCGGCCTGCA GAAGCCGACC 
GCGCGCGAGG TGGTCGAGCA CATCCTTCAC GGCGCGGTCG ACGCGATGAC CGACCCGAGC 
AACCCAGGCT GTCTGGCGGT ACAAGGCGCG CTGTGTTGCG GCGAGGCAGC CGAGACCATC 
AAGCAGGAAC TGGCTGCTCG CCGCGCCAAG ACCGAGGACG ATCTGCGCCT TCGCCTGGAC 
CGGGCGATCG CCGAAGGCGA CCTACCGGCG CAAGCCGACG CCGGCGACCT GGCCCGCTAC 
GTGTCGGCGA TCCTGCAGGG CATGGCGGTG CAGGCGGCGA GCGGCGCCCC AAGCGAGCAG 
CTGCACAAGC TCGCCGACAT CGCCCTCCGA AACTGGCCAC CCGTGTAG
 
Protein sequence
MAMGRPREFD VDAALDLALH VFWRKGYEGT SMADLTEAMG ITKPSLYAAF GNKEELFRKA 
LDRYVDGPGG YYQAGLQKPT AREVVEHILH GAVDAMTDPS NPGCLAVQGA LCCGEAAETI 
KQELAARRAK TEDDLRLRLD RAIAEGDLPA QADAGDLARY VSAILQGMAV QAASGAPSEQ 
LHKLADIALR NWPPV