Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3429 |
Symbol | |
ID | 6411103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3673409 |
End bp | 3674608 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642713309 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_001992406 |
Protein GI | 192291801 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAATA CACTTGTTCG GAATGTCGCG CTGGGTGCCG GGGTTGTGGC GGTTTCGGTG GCGCTGGTCG GCGGCGCAGC GCTGATCGGC CGCCCTGGTG GGGCGCTTGC CGAAACCACC GCGGCGCCTC CGCCGGCGGT GCCGGTTTCG GTGGCGCTCG TCGAATCCAA GGCGACCACG CCGTCCGACG CATTCTCCGG CCGGCTGGAG GCGATCGAGC GGGTCGAGAT CCGCTCGCGG GTCGCCGGTG CCGTCCAGCA AATCCAGTTC AGAGAAGGCG CTCTGGTAAA CAAGGGCGAC CTGTTGGTCC GGATCGATCC GTCGCTGTAC GCCGCTGAGG TCGATCGCGC CCAGGCGCAG TTGTCGGCGG CCCGCGCGCG CGTCGTCTTC ACCAAGGCCG ACGTCGAGCG CAGCCAGCAG CTCTCCAGCT CCAGCATCAC CCAGCGCGAG GTCGACAACC GCCTCAATGC CTATCGTGAG GCGGAGGCGA ACCTCAGATC GGCCGAAGCG GCGCTGAAGA CTGCCGAGCT GAACCTCAGC TATACTGAGA TCAGCGCCCC GGTGTCCGGC CGGGTCGGCA AGGTAGAGAT CACCGTCGGC AATCTGATCG CCGCCGGCCC GAACTCGCCG CTGCTCACCA CGTTGGTTTC GGTCAATCCG ATCTATGCCA GCTTCAATGC CGACGAGCAG GTGGTGACCC GCGCGCTGAA GACCCTCGCG GACGAAAACA CCCCGGGTGC GATCGAACGG ATTCCGGTCG AGATGACGAC CGTCGCGGGA GGGGCGCCGG TGAAGGGCAA GATGCAGTTC ATCGACAACC AGGTCGATCC GCGCTCCGGC ACGGTGCGGG TGCGTGCGGT ATTCGACAAT GCCGACGGCC GGCTGATGCC GGGCCAGTTC GCGCGGCTGT CGATGGGACA GCCGAAGCCG GAAGCAGCGC TGTTGGTCAG CGAGCGTGCG GTCGGCACCG ACCAGAACAA GAAGTTCGTG ATGGTGGTCG ATGCCCAGAA CCATGCCGAA TACCGTGAAG TGACGCTGGG GGCCTCGGTC GACGGCCTGC GGGTGGTGGC TTCCGGACTC AGGGCCGGCG AACGCATCGT GGTCAACGGC CTGCAGCGGG TCCGTCCCGG CGTCACCATC AAGCCCGAGA CGGTGGCGAT GGATGCCGCC GCCTCGAGCA AGACGGTCGC GCAGAACTAA
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Protein sequence | MANTLVRNVA LGAGVVAVSV ALVGGAALIG RPGGALAETT AAPPPAVPVS VALVESKATT PSDAFSGRLE AIERVEIRSR VAGAVQQIQF REGALVNKGD LLVRIDPSLY AAEVDRAQAQ LSAARARVVF TKADVERSQQ LSSSSITQRE VDNRLNAYRE AEANLRSAEA ALKTAELNLS YTEISAPVSG RVGKVEITVG NLIAAGPNSP LLTTLVSVNP IYASFNADEQ VVTRALKTLA DENTPGAIER IPVEMTTVAG GAPVKGKMQF IDNQVDPRSG TVRVRAVFDN ADGRLMPGQF ARLSMGQPKP EAALLVSERA VGTDQNKKFV MVVDAQNHAE YREVTLGASV DGLRVVASGL RAGERIVVNG LQRVRPGVTI KPETVAMDAA ASSKTVAQN
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