Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3417 |
Symbol | |
ID | 6411091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3657953 |
End bp | 3659857 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642713297 |
Product | K potassium transporter |
Protein accession | YP_001992394 |
Protein GI | 192291789 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3158] K+ transporter |
TIGRFAM ID | [TIGR00794] potassium uptake protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.120836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAG CCGTTTCCGA CGTCACGCTT GCGAAGGCTT CTCCCAAGCC GAATTCGTTC TGGACGCTCG CCCTGGGGTC GATCGGCGTC GTCTATGGCG ACATCGGCAC AAGCCCATTG TACGCCCTGA AAGAGAGCCT CACCGCCGCA TCGGCGGGCG GGGCGCTGAC GCAAGAGATG ATCTTCGGCG TGCTGTCGCT GATGCTGTGG ACGCTCCTGA TCATCGTCAC GTTGAAATAC GTGCTGCTGA TCATGCGAGC CGATAACCAC GGCGAAGGCG GAACGCTGAC CCTGATGGCG CTGCTGCAGA GCGTGATGCG GCGAAGGTTC GCGGCGATCT CGCTGCTCGG CATGGCCGGT GCCGCGTTGT TCTATGGCGA TGCCATCATC ACGCCGGCAA TCTCAGTGCT ATCCGCGGTG GAAGGCCTGA AGTTGGTGGC ACCCGGGTTC GATCCGTACA TCCTGCCGCT CAGCATGGCG ATCTTGGTCG GGCTCTTTTT GGTGCAGAGC TGGGGCACCG CCGCGGTGGC GACGTGGTTC GGCCCATTGA TGCTGATTTG GTTCGGCCTG ATGGCGGTCG CCGGGACCGC CAACCTGATG GACAACCTCC ACATCCTCGG CGCGGTCAAT CCGATCTACG GCATCGACTT TCTCATGCAT CACGGCCACG CCGGGTTGCT GGCGCTGGGT GCAGTCTTTC TGACAGTGAC CGGCGCCGAG GCGTTGTACG CCGACATGGG CCACTTCGGC CGGCGGCCGA TTCAGGTCGC GTGGCTGGTG CTGGTGTTTC CGGCGCTCGC GCTGTGCTAT CTGGGGCAGG GCGCAATGCT GCTGTCGCAT CCGGAGCGGC TGGAGAACCC GTTCTTCCTG CTGTTTCCGG ATTGGGCGCT GTTGCCGATG GTCTGGATCG CGACCGGCGC GACGATCATC GCCAGCCAGG CGGTCATCTC GGGCGCCTAT TCGCTGACAC AGCAGGCGAT CCAGCTCGGG CTGTTGCCGC GGATGGAGAT CCGCCGCACG TCCGAGACCG AGAAGGGCCA GATCTACATT CCCCGCGCCA ACTGGCTGCT GCTGATCGCG GTGCTGTATC TGGTGTTCGC ATTCAAATCG TCGAGCGCGC TGGCGTCGGC CTACGGCATT GCCGTCACCG GCACGATGGT GCTGACCAGC ATCATGGCAT TCTTCGTCAT GCGGAAATGC TGGCATTGGC CGGCCGCTGT CGCGACCGCG ATTATCGTGC CGTTCCTGAT CATCGATCTG ATCTTCCTGA TGGCCAATTT GCTCAAGATC GTCGACGGCG GCTGGATCCC GCTCATGATC GGCGTTGGCC TGATGGGCGT GATGGTGACG TGGCGACGCG GTTCGAAGAT CGTGGCGCGT AAGACGGTTC GGGACGAAAT CGATCTGAAC GACTTCATCG CCTCGATCTC GGTTTCGTCG TCGATCAGCC GGGTTCGCGG TACGGCCGTG TTCCTGACCG GCAACCCGAA CTCGACGCCG ACATCGTTGA TGCACAATCT GAAGCACAAC AAGGTTCTGC ATGAGAAGAA CGTGATCCTA CGGGTCGCGA CCGAAGACGT CCCGCGCGTC AGCGAGGACG AGCGGCTGAG CTATGAGCCG GTCAACGACA GCTTCGCCAA GATCACCATT CGGTTCGGCT ACATGGAGAC GCCGGACGTT CCCAAGGCGC TGGTCGCATG CCGGCCGCTG GGCTTCGCCT TCGACATGAT GAGCACGTCG TTCTTCCTGT CGCGGCGGGT GATCCGCCAG GCAAACCCGT CCGAGATGCC GCGTTGGCAA GGCTTACTGT TCGTCAACAT GGCCAAATGG TCGGACGACG CCAGCCTGTA CTTCAAGATC CCTACCGGTC GCGCGGTGGA AGTCGGGATG CAGATTACGG TGTGA
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Protein sequence | MTEAVSDVTL AKASPKPNSF WTLALGSIGV VYGDIGTSPL YALKESLTAA SAGGALTQEM IFGVLSLMLW TLLIIVTLKY VLLIMRADNH GEGGTLTLMA LLQSVMRRRF AAISLLGMAG AALFYGDAII TPAISVLSAV EGLKLVAPGF DPYILPLSMA ILVGLFLVQS WGTAAVATWF GPLMLIWFGL MAVAGTANLM DNLHILGAVN PIYGIDFLMH HGHAGLLALG AVFLTVTGAE ALYADMGHFG RRPIQVAWLV LVFPALALCY LGQGAMLLSH PERLENPFFL LFPDWALLPM VWIATGATII ASQAVISGAY SLTQQAIQLG LLPRMEIRRT SETEKGQIYI PRANWLLLIA VLYLVFAFKS SSALASAYGI AVTGTMVLTS IMAFFVMRKC WHWPAAVATA IIVPFLIIDL IFLMANLLKI VDGGWIPLMI GVGLMGVMVT WRRGSKIVAR KTVRDEIDLN DFIASISVSS SISRVRGTAV FLTGNPNSTP TSLMHNLKHN KVLHEKNVIL RVATEDVPRV SEDERLSYEP VNDSFAKITI RFGYMETPDV PKALVACRPL GFAFDMMSTS FFLSRRVIRQ ANPSEMPRWQ GLLFVNMAKW SDDASLYFKI PTGRAVEVGM QITV
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