Gene Rpal_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3411 
Symbol 
ID6411085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp3651264 
End bp3651869 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content67% 
IMG OID642713291 
Productpotassium-transporting ATPase subunit C 
Protein accessionYP_001992388 
Protein GI192291783 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAGG AAGTTCGTCC CGCCGTCGTG TCGCTGCTGG CGCTCACCAT GATCACAGGC 
CTGGCCTATC CGCTCGCCGT GACCGGCCTT GCTACCGTGC TGTTTCCGTA TCAGGCCCAG 
GGAAGCCTGG TCGAGCGGGG AGGCAAGGTA GTCGGCTCGG CGCTGATTGG GCAGGAGTTC 
AAGGGCGACG AGTATTTCCA TGGTCGGCCG TCGGCGACTG TCGCTCCCGA TCCGGCAGAC 
TCCAGCAAGA CTGTCTCTGC GCCGTATAAT GCGGCCAACT CCGGCGGCTC CAATCTGGGC 
CCGACCAGCA AGGCTCTGGC GGATCGTCTG AGTGAGGATG TCGCCAAGCT GAAGGCGGAG 
AACCCGGCAG CGCCGATTCC GGTCGATCTC GTCACCACCA GCGGCAGCGG GCTCGACCCG 
GACATCTCGC CGGAGGGCGC GCTGTTTCAG GTGCCGCGCG TCGCCAAGGC GCGCGGTGTG 
ACGGAGGAGC AGATCCGGAA GCTGGTCGGC GCCTCGATCG AGCAGCCGCT CGGCGGCGTG 
CTCGGCGAGT CGCGGGTCAA TGTGCTGAAG CTCAATCTCG CGCTCGACGC CGCGGCGCCG 
CGCTAA
 
Protein sequence
MLKEVRPAVV SLLALTMITG LAYPLAVTGL ATVLFPYQAQ GSLVERGGKV VGSALIGQEF 
KGDEYFHGRP SATVAPDPAD SSKTVSAPYN AANSGGSNLG PTSKALADRL SEDVAKLKAE 
NPAAPIPVDL VTTSGSGLDP DISPEGALFQ VPRVAKARGV TEEQIRKLVG ASIEQPLGGV 
LGESRVNVLK LNLALDAAAP R