| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3399 |
|---|
| Symbol | |
|---|
| ID | 6411073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 3638191 |
|---|
| End bp | 3638670 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642713279 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001992376 |
|---|
| Protein GI | 192291771 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.169777 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCA AGGATTTCGA GGACACCGTT CCGGTGTTCT TGCCCGAGCA GTTCTTCAAC
GGTCGGCTCG AGGGCTGGGC CGTGCTGGAA AGTCTCGTCG GCGGCTTGCA GAAGCGCGCG
ACGATCCAGG CCGAAGGCCG CTGGGATGCG GCGGCGCAGA CGGTGTCGTT CAGCGAGACC
TATCGGTTCG ACGACGGCTA CCGCGACACC CTGAAATGGA CCATTCGCAA GCTTGGCCCC
GGCCGCTACA GCGGTGCCGA ACCGCGCGTC GATGACGCTG CCGAAGGCGA TCAGGCTGGA
TGCGCCTTCA ACTGGCGCTA CACCCGCGAT ACGCCGCAGC CGGATGGCAG CTCGACCAAG
CTCAACTTCG ATGATTGGTT CTATCTGATC GAGCCCAACG CCTGCATCGT CCGCGGATCA
GCCGGCCGCC TCGGCCTGCC GTTCGCCACA GGGCACGTGA CCTATCGCAA GATTTCCTGA
|
|---|
| Protein sequence | MSIKDFEDTV PVFLPEQFFN GRLEGWAVLE SLVGGLQKRA TIQAEGRWDA AAQTVSFSET
YRFDDGYRDT LKWTIRKLGP GRYSGAEPRV DDAAEGDQAG CAFNWRYTRD TPQPDGSSTK
LNFDDWFYLI EPNACIVRGS AGRLGLPFAT GHVTYRKIS
|
|---|
| |