| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3394 |
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| Symbol | |
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| ID | 6411068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3633368 |
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| End bp | 3634132 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713274 |
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| Product | phage head morphogenesis protein, SPP1 gp7 family |
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| Protein accession | YP_001992371 |
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| Protein GI | 192291766 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2369] Uncharacterized protein, homolog of phage Mu protein gp30 |
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| TIGRFAM ID | [TIGR01641] phage putative head morphogenesis protein, SPP1 gp7 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.200989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTAAGG GATTCGGCAC AGCTACGGCG TGTAGTTGCT GCGGCGGAGT CACCACCGCG
TTGCAGGCTA AGGTCGTTCC GTTCTCGGTT GCGCCCAAAG AGGCGATCGA TTTCCTGCGG
AGAAAGGTTG ACGTTCCGAC GGCGACCTGG ACCGATCTTT GGCAGGCCGA GCACTCGGTC
GCCTTCACGG TCGCCGGCGC ACAGACCGAC GCGCTGGTGA AGGACTTCCA CGAAGCGGTG
CAGCGCGCGA TCGACGACGG CTTGACGATC GAGGACTTTC GCAAGGACTT CGACCGCATC
GTCGAAAATC ACGGCTCGGA CTACAACGGC TCGCGCGGCT GGCGCTCGCG GGTGATCTTC
GACACCAACG TCTCCACCGC CTATGCGGCG GGCCGCTGGG AGCAGATCCA GCGCGTGAAG
CGCACGCGGC CTTATCTGCG ATACGTCCAC CTCGAAGGTC AGGCGCATCC GCGTCCGCAG
CACGCGGCGT GGCACGGCCT GGTGCTGCCG GTCGATGATC CGTGGTGGGA TACGCATTAC
CCGCCGAACG GCTGGTTTTG CCACTGCACC GTCATGAGCG TCTCGGATAG CGACCTTTCA
CGCTACGGCT GGAGCGTCGC CGACCAGGCG CCGCAGACCA TCATGGTTCA GCGGCAGGTG
CGGCAGTCAG ATGGCAGCAT TCGGACGATC GATGTTCCGG ACGGTGTTGA CCCTGGATTT
GCCTATCGAC CGGGTGAGAT GCCAGATGCC TTTGGAGAGG ATTGA
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| Protein sequence | MLKGFGTATA CSCCGGVTTA LQAKVVPFSV APKEAIDFLR RKVDVPTATW TDLWQAEHSV
AFTVAGAQTD ALVKDFHEAV QRAIDDGLTI EDFRKDFDRI VENHGSDYNG SRGWRSRVIF
DTNVSTAYAA GRWEQIQRVK RTRPYLRYVH LEGQAHPRPQ HAAWHGLVLP VDDPWWDTHY
PPNGWFCHCT VMSVSDSDLS RYGWSVADQA PQTIMVQRQV RQSDGSIRTI DVPDGVDPGF
AYRPGEMPDA FGED
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