Gene Rpal_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3360 
Symbol 
ID6411034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3614723 
End bp3615367 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID642713240 
Productputative phage repressor 
Protein accessionYP_001992337 
Protein GI192291732 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCCT TGATCAGGGC GATCCTCGAC GCCCGGGATT GGACGCAGGC GGACCTTGCT 
GCGCGATTGC GCACGACTCA GGTCACAGTT TCGAGGTGGC TGGACGGCAC CGAGCCTCGT
GGACCAATGC GTGACAGGCT TCGCGATCTG GCCGAAGAGA GCGGGCTTGT CCCGCAAGCC
CGCGCGAACC ACGTAATCAA AATTATGGGG CGGGTGGGCG CCGGAGCGAT TATCGATCCG
GATTATGAGC AAACCCCTGA GGACGGACTC GAGCAAATCG AGTTGCCGTA TCCGATCGGC
AGCGATCTGA TCGGGTTCGA AGTGAGCGGC ACGTCGATGA TGCCGAAGTA CGACCCTGGT
GAGATTCTGG TCGTTCAGCG AGAGCAGCCG GTTTCGTTCG ACAGCATGAT CGGGCAGTAT
GCGGTGGTTA GAACCGATGA CGGGCGGCGG CTCGTCAAAC GGGTGATGCC GGGACCGAAA
TCAAATCTCT ACAACCTTGA GAGTGCCAAC GCCGAGACGA TCGTCGGCGC TCGGCTGGTG
TGGGGTAGCC CGGTTCAAAT GGCGATACCG AACGTTCAGC TGCGCAGGAT CGCCATGAAA
TCGTCGAGGT CTAGCAAGGC GGCGAGATCG AAGAAGTCGT CGTAG
 
Protein sequence
MKALIRAILD ARDWTQADLA ARLRTTQVTV SRWLDGTEPR GPMRDRLRDL AEESGLVPQA 
RANHVIKIMG RVGAGAIIDP DYEQTPEDGL EQIELPYPIG SDLIGFEVSG TSMMPKYDPG
EILVVQREQP VSFDSMIGQY AVVRTDDGRR LVKRVMPGPK SNLYNLESAN AETIVGARLV
WGSPVQMAIP NVQLRRIAMK SSRSSKAARS KKSS