| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3342 |
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| Symbol | |
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| ID | 6411015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3600241 |
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| End bp | 3602790 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713221 |
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| Product | hypothetical protein |
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| Protein accession | YP_001992319 |
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| Protein GI | 192291714 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.696824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTT TTACAGCCAT CTTCGGCGCA GTTGCTTCGG CGATCGGGCT TACCGGTTTC
TTCGCGACGG CCTTCGTGGC GGTCGGCGTT CTCGCCACCA CAGTCGGCAT CTCCTATCTG
CTGCGCAAGA AGCCGGAGCA GGCTGCGCAG GCAGCCGAGA GCCACTTCTC TGCGCAGGGC
CAGCTGCAGG CCTCCGGCGA CGTGCCGCGC AGCTTCATCG TCGGCTACAG CTTCACGGCT
GGATCGCTGG TCTACGCCAA CGAGTGGGGC AATGACGGCG ACACGCCGAA CGCCTATCAC
GTCCAGGTCA TCGCGCTGTC CGACCTGCCG AGCGGCCCGC TGCGCGAAGT GTGGGTCAAC
GGCGAGCAGT GCACGCTGCT GTCCGGCGAG GCGCACGGCG AGTTCGGCGT TCCGCTGGCG
CAGTATCGCA AGGACGGTAA GGACCATCTG TGGGTCAAGT ACTACAACGG CCGGCAAACG
GCGGCCGACC CGTATCTGGT CAACCGGGTG TCGAGCGCGG ACTATCCCTA TGAGGCGACA
CGCGTCGGCT TTGGCGTCGC CTATGTGATC TGCACCGCGC TGGTCGAGGA CACGCTGTTC
GCCGGCTTCC CGACCTATAA GTTCGTGCCA GGCTCGATCC CGCTCTATGA TCCTTCGAAA
GACACCACCG CCGGTGGCGA CGGACCGCAG CGCTGGAGCG ATCGTTCCAC CTGGGGCGGC
GACGGCGACG ATCTGCCGGT AGTCCAGGCC TACAACATCC TGCGCGGCAT CAGCTACGGC
GGCACCTGGT TCTACGGCGC GCAGCGCATG AGCGCAGCGC GGCTGCCGAT CACAAACTGG
CTGGTGCAGA TCGCCAAGTG CCGCAACGGC GTCGAGGGCG AGAATGGGAT CGAGCCGGCC
TACAGGTCTG GCGGTCAGAT CTCGGTCGAC CAGGCGCCGC TCGACATCAT CACCAAGCTC
AACACCACCT GTCAGGGACG GCTGACCGAA GTCGGCGGCT TCTACAAGTA TCACGCCGGC
GCGCCGGATA GTCCGTCGTT CAGCTGGACC GACGTGGATC TGCTGTCGAC CGAGGAGCAT
ATGTCCCGGC CGTTCTTCTC GCTCGACAAG AGCACCAACG GCATCCAGGC GCGCTACCCG
GATCCGGCGC AGGGCTGGAG CGTCGTGACG GCGCCGGCTT ATCACCGACC CGATCTCGAA
GCGCGCGACG GCGGCCGGCG GCTGATGGCA ACGCCGCTGC TCGACTTCGC CCCGTATCCG
GCGCAGGTGC AACGGCTGCA GAAAAGCGCG ATCGACGAGG CCCGGCGCGC TCGCACGCAC
GAGCTGGCAT TCCCGCCGGT GTTCTGGCTG GTCGAGCCCG GCGACGTCGG ACAATGGACA
TCGACCCGCA ACGGCTACTC GTCCAAGCTG TTCCGCGTCG ACCAGATGGT CGACCACGCC
AACCTCGACG TCACCATGGC GGTGACCGAG GTCGATCCCG GCGATTACGA CTGGGATCAC
GAGACCGATT ACCAGGGCGT GGCGATCGGC CCGACGACGT TCGTGCGCCC GGCGCCGCAG
GGAACGCTGA GCTGGCTGGT CGAACCCTAT GTCGAGCGCG ACACAAGCGG GCTGGAACGG
CGCCCGTGCA TCCGGCTGGC ATGGGACGGC ACCTTGGCGG GAATCTCCGG CGTCGCCTAT
CGGGTGCGTG AGGCGGAGAG CGAAGACATC GTCGTCAGTA ATCAGACGCC GTTCTATGCC
GAAGGCGCGA TCATCATCCG CGGGCTGCTC CCGGCGACCG ACTATGAAGT CGAGGCGCGG
CTGATTCCGA CCGCGCCGCG CGATATGGTC CCCTCGGACT GGATGCCGGT GACAACGCCG
GACGTTCGGT TGACGATGGA AGATCTCGTC GCAGGCATTC AGCATGTCAT CGCGACCCTG
AAACAGGAGC GCGAGGAGAT CACTGCGATC CGCGCCGACC TGTCGAACAT GATCGCGACC
GTCGCGGCGC GCGGTGTCGT CGACAAGTAT CTCTTGCACC AGGAGACTGC GGACAGCCGC
GCTTCCGTCG AGGTGGTCAG CCAGGCGCTC GCCACACTCG ACGAAGCGTT CGCCTCCTAT
CAGACCGAAG TGACGGCCGA GCTCGGGACG GTCTCGGCGA GTGTCACCAC GAATTCGAGT
GCGATCGCGC GGCTCGACGG CTACGCGGCG GCGCGCTGGT CGGTGACGAC CAACGTGAAC
GGTGCGATCA GCGGCATCGA GCTGATCAAC GGCGGCCAAT CGCTGTCTCA AATCATCTTC
CAGGCCGACA AGTTCAAGTT TCAGTTGCCC GGCTACGCCA ACGGCGCGCC GCAAGACTTC
CTCGTTGTCG GCCAGGTCGG CGGCGTCCCG ACATGGGGCC TCGCCGGCAA CATGGTGCTC
GATGGCACTT TCACGGCGCG GATGTTCAAC GTCGCGCAGC TCTCGGCGAT CACTGCCGAT
CTTGGGCACG TCACGTCCGG ATATCAGCAG AGCCCCGATG GCAAGATGAT CGCCGACTGG
AACAACGGCC GGATGGAGTG GTGGGATTGA
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| Protein sequence | MAIFTAIFGA VASAIGLTGF FATAFVAVGV LATTVGISYL LRKKPEQAAQ AAESHFSAQG
QLQASGDVPR SFIVGYSFTA GSLVYANEWG NDGDTPNAYH VQVIALSDLP SGPLREVWVN
GEQCTLLSGE AHGEFGVPLA QYRKDGKDHL WVKYYNGRQT AADPYLVNRV SSADYPYEAT
RVGFGVAYVI CTALVEDTLF AGFPTYKFVP GSIPLYDPSK DTTAGGDGPQ RWSDRSTWGG
DGDDLPVVQA YNILRGISYG GTWFYGAQRM SAARLPITNW LVQIAKCRNG VEGENGIEPA
YRSGGQISVD QAPLDIITKL NTTCQGRLTE VGGFYKYHAG APDSPSFSWT DVDLLSTEEH
MSRPFFSLDK STNGIQARYP DPAQGWSVVT APAYHRPDLE ARDGGRRLMA TPLLDFAPYP
AQVQRLQKSA IDEARRARTH ELAFPPVFWL VEPGDVGQWT STRNGYSSKL FRVDQMVDHA
NLDVTMAVTE VDPGDYDWDH ETDYQGVAIG PTTFVRPAPQ GTLSWLVEPY VERDTSGLER
RPCIRLAWDG TLAGISGVAY RVREAESEDI VVSNQTPFYA EGAIIIRGLL PATDYEVEAR
LIPTAPRDMV PSDWMPVTTP DVRLTMEDLV AGIQHVIATL KQEREEITAI RADLSNMIAT
VAARGVVDKY LLHQETADSR ASVEVVSQAL ATLDEAFASY QTEVTAELGT VSASVTTNSS
AIARLDGYAA ARWSVTTNVN GAISGIELIN GGQSLSQIIF QADKFKFQLP GYANGAPQDF
LVVGQVGGVP TWGLAGNMVL DGTFTARMFN VAQLSAITAD LGHVTSGYQQ SPDGKMIADW
NNGRMEWWD
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