| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3325 |
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| Symbol | |
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| ID | 6410998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3583642 |
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| End bp | 3587415 |
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| Gene Length | 3774 bp |
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| Protein Length | 1257 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713204 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001992302 |
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| Protein GI | 192291697 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCG AACGGCGCTA CACCAAGGAC GGCCAGTCTC CTTACGCGGA CATCGCGTTC
AGGCTGACGA CCAGCGAGAT TCGCAATCCG GACGGATCGG TGGTGTTCCG CCTCGAGAAT
GTCGAGGTGC CGGAGTTCTG GTCGCAGGTC GCCTCCGACG TGCTGGCGCA GAAGTATTTC
CGCAAAGCCG GCGTCGCCGC GCGCCTGAAG AAGGTCGAGG AAGAGAGCGT TCCGTCGTGG
CTGTGGCGCT CGGTCGCCGA CACCGACGCC CTCACCGCGC TGCCCGAGAG CGAGCGTTAC
ACGTCTGAGC ATTCCGCCAA GCAGGTATTC GATCGCCTCG CCGGCTGCTG GACCTATTGG
GGCTGGAAGG GCAGCTACTT CTCGAGCGAG GACGACGCCC GCGCGTTCTT CGACGAGCTG
CGCTACATGC TGGCGATGCA GATGGTGGCG CCGAATTCGC CGCAGTGGTT CAACACCGGC
CTGCATTGGG CCTACGGCGT TGATGGCCCC GGCCAGGGCC ACTACTACGT CGACTACAAG
ACCGGCAAGC TGACCAAGTC GAAGTCGGCC TACGAGCACC CGCAGCCGCA CGCCTGCTTC
ATCCAGGGCA TCGAGGACGA CCTCGTCAAC GACGGCGGCA TCATGGACCT GTGGGTCCGC
GAGGCGCGGC TGTTCAAATA CGGCTCCGGC ACCGGCTCCA ACTTCTCGCG GCTGCGCGGT
GAAGGCGAAC GCCTGTCGGG CGGCGGCAAG TCCTCCGGCC TGATGAGCTT CCTGAAGATC
GGCGACCGCG CCGCCGGCGC CATCAAGAGC GGCGGCACCA CCCGCCGCGC CGCCAAGATG
GTGGTGGTCG ACGTCGATCA CCCGGACATC GAGGCCTATA TCGACTGGAA GGTGAAGGAG
GAGCAGAAGG TCGCCGCTCT CGTCACCGGC TCCAAGGTCA ACCAGAAGCA CCTCAAGGCG
ATCCTGAAGG CCTGCGTCAA CTGCCAGGGC TCGGGCGACG ACTGCTTCGA TCCGGAGAAG
AACCCGGCGC TGCGCCGCGA GGTCAAGCTG GCGCGCCGCG CGCTGGTGAC CGACGCGATG
ATCAAGCGCG TCATTCAGTT CGCCAAGCAG GGCTACAAGG AGATCGACTT CCCGATCTAC
GACACCGACT GGGATTCTGA GGCCTACCTC ACCGTCGCCG GCCAGAACTC CAACAACTCG
GTGTCGCTGA AGGACGACTT CCTCCGCGCG GTCGAGACCG ACGGCGACTG GCACCTCACC
GCCCGCACCA ACAAGAAGGT GGTGAAGACG CTGAAGGCGC GCGACCTGTG GGAGAAGATC
GGCACCGCGG CCTGGGCCAG CGCCGATCCC GGCCTGCACT TCAACACCAC GATGAACGAC
TGGCACACCT GCAAGGCGTC CGGCGACATC CGCGCGTCCA ATCCGTGCTC GGAATACATG
TTCCTGGACG ACACCGCCTG CAACCTCGCC TCGGCGAACC TGCTGGCGTT CTACGACGTC
GGCGCCAACC GCTTCGACCT CGATGCCTAC GAGCATCTGT GCCGGCTGTG GACCGTGGTG
CTCGAAGTCT CGGTGCTGAT GGCGCAGTTC CCGTCCAAGC AGATCGCCGA GCTGTCTTAC
GAATTCCGCA CCCTCGGCCT CGGCTTCGCC AATATCGGCG GCCTCTTGAT GACCATGGGT
CTGTCGTACG ACTCCAAGGA AGGCCGCGCG CTGTGCGGCG CGCTGTCGGC GATCATGACC
GGCACTGCGT ATGCAACCTC GGCCGAGATG GCCGCCAAGC TCGGCGCCTT CCCCGGCTAC
AAGAAGAACG CCGACCATAT GCTGCGGGTG ATCCGCAATC ACCGCCGCGC CGCGCACGGC
GAGAGCCGCG TCTATGAGGC GCTGTCGGTC AACCCGGTGC CGCTCGACCA CACCAACTGC
CCGATCCCGG ACGCCGTCGC CCACGCCAAG GCGGCCTGGG ACAAGGCGCT CGAACTCGGC
GAGCAGCACG GCTACCGCAA CGCGCAAGTG ACGGTGATCG CGCCGACCGG CACCATCGGC
CTCGTCATGG ACTGCGACAC CACCGGCATC GAGCCCGACT TCGCGCTGGT GAAGTTCAAG
AAGCTGGCCG GTGGCGGCTA CTTCAAGATC ATCAACCGCG CGGTGCCCGC CGCGCTGCGC
GTGCTCGGCT ATCCGGAGCA CCAGATCCAG GAGATCGAAG CCTACGCCGT CGGCCACGGC
TCGCTCTCCA ACGCACCGGC GATCAACGCC TCGACCCTGA AGGCCAAGGG CTTCACCGAC
GAAGCTCTGG CAAAGGTCGA AAAGGCGCTG CCGACCGCGT TCGACATCAA GTTCGCCTTC
AACAAGTGGA CGTTCGGCGA GGACTTCCTG AAGGACGTCC TCAAGATCGA AGCCGAGCAG
ATCGCACAGC CGAATTTCGA CCTTCTCACC GCGCTCGGCT TCACCAAGCG CGAGATCGAG
GCCGCCAACA TCCACATCTG CGGCGCGATG ACGGTCGAAG GTGCCCCGCA TCTGAAGCCC
GAGCACTACG CGGTGTTCGA TTGCGCCAAT CCGTGCGGCA AGATCGGCAA GCGCTATCTG
TCGGTCGAGA GCCACATCCG GATGATGGCC GCGGCGCAGC CGTTCATCTC GGGTGCGATC
TCCAAGACCA TCAACATGCC GAACGACGCC ACGGTGGAGG ACTGCAAGTC CGCCTACATG
CTGTCGTGGA AGCTGGCGCT GAAGGCCAAC GCGCTTTACC GCGACGGCTC CAAGCTGTCG
CAGCCGCTGA ATTCGCAGCT GATCGCGGAC GACGACGAGG ACGAGGATAT CGATACCTTC
CTCGACAAGC CGATGGCCGC GCGCGCCACC CACATCTCCG AGAAGGTGGT GGAACGGCTG
GTCGAGCGCA TCGTGGTGAT GCGCGAGCGC GAGAAGATGC CGGATCGCCG CAAGGGCTAC
ACCCAGAAGG CGGTGGTCGG CGGCCACAAA GTGTACTTGC GCACCGGCGA ATACGATGAC
GGCCGCCTCG GCGAGATCTT CATCGACATG CACAAGGAAG GCGCGGCGCT GCGCTCCTTC
ATCAACAACT TCGCGATCGC GGTGTCGCTC GGCCTGCAAT ACGGCGTGCC GCTCGAAGAA
TATGTCGACG CCTTCACCTT CACCCGGTTC GAGCCGGCCG GCCCCGTCCA GGGCAACGAC
TCGATCAAAT ACGCCACCTC GATCCTCGAC TACGTGTTCC GCGAGCTGGC GGTGAGCTAC
ATGGGCCGGT TCGACCTCGC CCATGTCGAT CCGACCGAGA CCGGCTTCGA TGCCATCGGC
AAGGGCGTCG ACGAAGGCAA GGTGCCGGAT GGCGGCGTGA TCGCGGGCCC GGCGTCGGCG
ACCAAGTACC TGTCCAAGGG CCTGACCCGG TCGCGCACCG ACAACCTGGT GGTGATGCGC
AGCACCCCTG CCCATCCGGC GGACACCACG CCGCGCAACG CCCCGTCGGG CGCCGCGCCG
ACCGTCACCG CGCTGGCCTC CTCACGCGTC GGCGACGCCC TCGAAGGCGC CACCGCCTTG
AAGCAGGAAG TGCAGACCGA CCTGTCGCCG ACCGAAAAGC TGGAAGCGCT GCAGTGGAGC
AAAGCCACCA CCGCCGCGAC CCAGCCCGCC CCGAGCAAGG CCGAACGCCG CGCCGAAGCC
AAAGCCAAGG GCTACGAAGG CGAGATGTGC TCGGAGTGCG GCAACTTCAC GCTGGTGCGG
AATGGGACGT GTATGAAGTG TGATACATGC GGGTCCACGA CGGGGTGCTC GTAA
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| Protein sequence | MKIERRYTKD GQSPYADIAF RLTTSEIRNP DGSVVFRLEN VEVPEFWSQV ASDVLAQKYF
RKAGVAARLK KVEEESVPSW LWRSVADTDA LTALPESERY TSEHSAKQVF DRLAGCWTYW
GWKGSYFSSE DDARAFFDEL RYMLAMQMVA PNSPQWFNTG LHWAYGVDGP GQGHYYVDYK
TGKLTKSKSA YEHPQPHACF IQGIEDDLVN DGGIMDLWVR EARLFKYGSG TGSNFSRLRG
EGERLSGGGK SSGLMSFLKI GDRAAGAIKS GGTTRRAAKM VVVDVDHPDI EAYIDWKVKE
EQKVAALVTG SKVNQKHLKA ILKACVNCQG SGDDCFDPEK NPALRREVKL ARRALVTDAM
IKRVIQFAKQ GYKEIDFPIY DTDWDSEAYL TVAGQNSNNS VSLKDDFLRA VETDGDWHLT
ARTNKKVVKT LKARDLWEKI GTAAWASADP GLHFNTTMND WHTCKASGDI RASNPCSEYM
FLDDTACNLA SANLLAFYDV GANRFDLDAY EHLCRLWTVV LEVSVLMAQF PSKQIAELSY
EFRTLGLGFA NIGGLLMTMG LSYDSKEGRA LCGALSAIMT GTAYATSAEM AAKLGAFPGY
KKNADHMLRV IRNHRRAAHG ESRVYEALSV NPVPLDHTNC PIPDAVAHAK AAWDKALELG
EQHGYRNAQV TVIAPTGTIG LVMDCDTTGI EPDFALVKFK KLAGGGYFKI INRAVPAALR
VLGYPEHQIQ EIEAYAVGHG SLSNAPAINA STLKAKGFTD EALAKVEKAL PTAFDIKFAF
NKWTFGEDFL KDVLKIEAEQ IAQPNFDLLT ALGFTKREIE AANIHICGAM TVEGAPHLKP
EHYAVFDCAN PCGKIGKRYL SVESHIRMMA AAQPFISGAI SKTINMPNDA TVEDCKSAYM
LSWKLALKAN ALYRDGSKLS QPLNSQLIAD DDEDEDIDTF LDKPMAARAT HISEKVVERL
VERIVVMRER EKMPDRRKGY TQKAVVGGHK VYLRTGEYDD GRLGEIFIDM HKEGAALRSF
INNFAIAVSL GLQYGVPLEE YVDAFTFTRF EPAGPVQGND SIKYATSILD YVFRELAVSY
MGRFDLAHVD PTETGFDAIG KGVDEGKVPD GGVIAGPASA TKYLSKGLTR SRTDNLVVMR
STPAHPADTT PRNAPSGAAP TVTALASSRV GDALEGATAL KQEVQTDLSP TEKLEALQWS
KATTAATQPA PSKAERRAEA KAKGYEGEMC SECGNFTLVR NGTCMKCDTC GSTTGCS
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