| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3324 |
|---|
| Symbol | |
|---|
| ID | 6410997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 3582078 |
|---|
| End bp | 3582977 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642713203 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_001992301 |
|---|
| Protein GI | 192291696 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATC CTTCTCCGAT TCCTGCGCGC GGGCGCATCG CGTCCGGCGG CCTGGTGTTC
CTGACCGTCA CCACCGTGGC GTGGGGCCTG AGCTGGCCGG TCACCAAATA TCTGATCTCG
CAATGGCCGC CGCTGCCGCT GCGCGGCCTC ACAGGAATCG CCGGCTCGCT GGCGCTGTTC
GGCTATGCGG CGCTGCGCGG CGACAGCCTG GCGGTGCCGC GCGACCAGCG GCTGCGATTG
GTGATCTCGG CGTTCTTCAA CGTCACGCTG TGGATGGCGG TGATGGGCCT GGCGCTGCTG
TGGCTGCCGG CCGGCGAGAC CGCGGTGATC GCCTACACCA TGCCGGTGTG GACCGCACTA
CTGGCCTGGC CGCTGCTCGG CGAGCGGCTG ACGCTGCGCC GGGTCGCGGC GCTGGCGTTG
GCGTTCGGCG GCATCGCGGC GTTGATGGGC GCTGCGGGCT TCGCTGCCAG CATGACGAAG
CTGCCCGGCA TCCTGCTGGC GCTGACCGGC GCGCTCGGCT TCGCGCTCGG CACCATCTTC
CTGAAGCGGT TTCCGATCGC GCTGCCCGGT GCCACTTCGG CGGCGTGGCA GATCGGGCTC
GGCTGCATTC CGGTCGCAGT GATCGGGCTG GCGTTCGAGA TCCCGCACGT CTCGGTGCTG
ACGCCGCTCG GCTGGGCCGG GCTGGTGTAT CTGGTCGTGA TCCAGTTCTG CATCGCTTAC
GTCTGCTGGT TCGCCGCGCT GCAGCGGCTG CCGGCGTCGG TCGCGGCGAT CGGTACCATG
GCGACCCCGG TGATCGGCGT GGTCGCCTCG GCGGTTGCGC TGCACGAGCC GCTCGGCGTC
GGCCAGATCG CCGCGCTGGT GATGACGCTG ACCGGCGTGG CGTTGGCGAC GCGGTCGTGA
|
|---|
| Protein sequence | MSDPSPIPAR GRIASGGLVF LTVTTVAWGL SWPVTKYLIS QWPPLPLRGL TGIAGSLALF
GYAALRGDSL AVPRDQRLRL VISAFFNVTL WMAVMGLALL WLPAGETAVI AYTMPVWTAL
LAWPLLGERL TLRRVAALAL AFGGIAALMG AAGFAASMTK LPGILLALTG ALGFALGTIF
LKRFPIALPG ATSAAWQIGL GCIPVAVIGL AFEIPHVSVL TPLGWAGLVY LVVIQFCIAY
VCWFAALQRL PASVAAIGTM ATPVIGVVAS AVALHEPLGV GQIAALVMTL TGVALATRS
|
|---|
| |