Gene Rpal_3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3323 
Symbol 
ID6410996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp3580980 
End bp3581969 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content68% 
IMG OID642713202 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001992300 
Protein GI192291695 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCCA ATACGAAGAA GCTGCTGGTG ACGGAATCGT TGTCGCAGCG GGGCAGGGCG 
CTGATCGCCG AACGCGGCGA TATCGAGATG ATCGAATTTC CCAACATGAT CTCGGCGGAG 
GATTTCGACG CGCTGCTGCG CACTGAAGCG CCGGTGCATG GCGTCGCGCT CGGCGCCACC 
CGGTTCGGCG AGCGCGAACT CGACGCGGCG CAGCAGATGC GCGTGGTGGC GCGGATCGGC 
GTCGGCTATG ACGCGATCGA CGTGCCGGCG CTGAACAAGC GCAAGGTGCC GCTGATGACC 
GCCGGCACCG CGAATTCGCC CTCGGTCGCC GAGCAGGCGC TGTTCATGAT GCTGACGCTT 
GCCAAGCGCG GCGCCGAGCT GCACGCGCTG GTGAAGACCG GCGCCTGGGC GACGCGGCTC 
GGGCTGCTGC CGTTCGATCT GTTCGGCAAG ACGGTGCTGA TCGTCGGCTT CGGCCGCATC 
GGCACCCGCA CCGCCAAGCG CTGCCTGGCG ATGGAAATGA ACGTCGAGGT GTACGATCCC 
TACGTGCCGG CGGCGGCGAT CGAAGCGGCC GGCTGCAAGC CGGTGTCCGA TCTCGACGCC 
GCGCTCCCCG ACGCCGATTT CGTCAGCCTG CATTGCCCGA AGACCGCGGA GACCACCGGG 
CTGTTCGATG CGGCGCGGCT GTCGAAGATG AAGCCGACCG CATACCTCAT CAACACCGCG 
CGCGGCGGCA TCGTGGTCGA GCAGGCGCTG TACGACGCGC TGCTCGCCGG GAAGCTCGCC 
GGCGCCGGGC TCGATGTGTT CGAGCAGGAG CCGCCGCCGC ACGGTCACAA GTTGTTCGAT 
CTGCCCAACG TGATCATCGC GCCGCATGTC GCCGGCGTCA CCCGCGAAGC GCTCGACCGG 
ATGGGCGAGC AGACTGCCCG CAACATGCTG AGCGTGCTCG ACGGCGACCC GATCCGCGCC 
AACGTCGTCA ATCAGGATGT GCTCGGTTAG
 
Protein sequence
MTSNTKKLLV TESLSQRGRA LIAERGDIEM IEFPNMISAE DFDALLRTEA PVHGVALGAT 
RFGERELDAA QQMRVVARIG VGYDAIDVPA LNKRKVPLMT AGTANSPSVA EQALFMMLTL 
AKRGAELHAL VKTGAWATRL GLLPFDLFGK TVLIVGFGRI GTRTAKRCLA MEMNVEVYDP 
YVPAAAIEAA GCKPVSDLDA ALPDADFVSL HCPKTAETTG LFDAARLSKM KPTAYLINTA 
RGGIVVEQAL YDALLAGKLA GAGLDVFEQE PPPHGHKLFD LPNVIIAPHV AGVTREALDR 
MGEQTARNML SVLDGDPIRA NVVNQDVLG