| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3322 |
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| Symbol | |
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| ID | 6410995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3579350 |
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| End bp | 3580780 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713201 |
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| Product | Amidase |
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| Protein accession | YP_001992299 |
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| Protein GI | 192291694 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTCA AGGAGTACGG CGATTACGAC GGCGTCGGCC TCGCCGAACT GGTCCGCAGC
AAGCAGGTCA CCGCTGTCGA ACTGCTCGAC GAAGCGATCG CTCGGACCGA TGCGCTCGAT
CCCAAGCTCA ACGCGGTGGT GGTGCGGCAC GACGACTACG CGCGCAAGCA GATCGAAGCC
GGGCTGCCGC AGGGGCCGTT CACCGGTGTG CCGTTTCTAT TGAAGGATCT CGATTTGCTC
GCCGGCACGT GCACCACCTT CGGTGCCAGC CTGTACAAGG ACTTCGTTGC GCCCCACACC
GGCACGCTGG CGGGGCGGTT TCTCGCCGCC GGCGTGACGA TCTTCGGCAA GAGCGCCAGC
CCGGAATTCG GCCTGATGCC GACCACGGAG TCGCGGCTGC ACGGGCCGAC CCGCAATCCG
TGGAATATTG ATCACTCCTC CGGTGGCTCG TCGGGCGGCG CTGCGGCCGC GGTGGCGGCG
CGCATTTTGC CGGTGGCCCA TGCCAGCGAC GGTGGCGGCT CGATCCGGAT TCCGGCCTCC
GCCTGCGGCG TGTTCGGGCT CAAGCCGACG CGGGCGCGCA ATCCGATTGG GCCGGATCGC
GGCGAGGGCT GGGGTGGCTT CGCTTGTGGT CACGTGGTGA GTATCAGTGT CCGCGACAGC
GCCGCGATGC TCGATGCGCT GCACGGCCCC GAGCCGTCGA GTCCTTACGT CGCCCCGCCG
CCGGAGCGGC CGTTCGCCGA GGAAGTTGGC CGTGAACCAG GCCGGTTGCG GATCGCGTTT
ACCGACCGTT CGACCTATGG TGATGCGATC GATCCGGAGG TTGCTGCGGC GGTGCGTGAT
ACCGCAAGGC AGCTCGAAGG GCTCGGTCAT CACGTCGAAG AACGCGCACC GGTGCTACCT
GCCGATCCGG CGCAGGTGAT CGCCACCATC GTTGCCTGCA ACACCGGCCT TGCGGTGCAG
CTCGCCGAAC AGACGCTCGG CCGCGCCATG ACCGAACGAG ATTTTGAAGT GCTGACGCTG
GCGTCGGCCG CCAATGCACG CAAAGCGAGC GGTGTCGATT ATTGCGCGGC GCAGCTCGCT
GCGTTCCAGA TCTCGCGCGC GCTGGCGGAG TTTTTCACGA GCATCGATGT ATTTCTGTCG
CCGACGCTGT GCACGCTGCC GCTGCGGATC GGCGAAATTA ATACCATGGC GCACGATCTC
TCCGGGATCA GCCCGACGCT GCGTCGGTAT ATTCCGGGCA CGAGTCTGTT TAATATGTCC
GGACAACCAT CGATGTCGGT GCCGCTGGCG TGGAGTGCAA GCGGCCTGCC GATCGGCATG
ATGTTCGCAG GCCGGTTCGG CGACGAAGCA ACACTATTAC GTCTCGCTGC GCAGCTCGAG
CGCGAACGGC CGTGGAAAAC TCGGCGTCCG CCGGTATATG CCTCGACATA G
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| Protein sequence | MAFKEYGDYD GVGLAELVRS KQVTAVELLD EAIARTDALD PKLNAVVVRH DDYARKQIEA
GLPQGPFTGV PFLLKDLDLL AGTCTTFGAS LYKDFVAPHT GTLAGRFLAA GVTIFGKSAS
PEFGLMPTTE SRLHGPTRNP WNIDHSSGGS SGGAAAAVAA RILPVAHASD GGGSIRIPAS
ACGVFGLKPT RARNPIGPDR GEGWGGFACG HVVSISVRDS AAMLDALHGP EPSSPYVAPP
PERPFAEEVG REPGRLRIAF TDRSTYGDAI DPEVAAAVRD TARQLEGLGH HVEERAPVLP
ADPAQVIATI VACNTGLAVQ LAEQTLGRAM TERDFEVLTL ASAANARKAS GVDYCAAQLA
AFQISRALAE FFTSIDVFLS PTLCTLPLRI GEINTMAHDL SGISPTLRRY IPGTSLFNMS
GQPSMSVPLA WSASGLPIGM MFAGRFGDEA TLLRLAAQLE RERPWKTRRP PVYAST
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