Gene Rpal_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3320 
Symbol 
ID6410993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp3577427 
End bp3578557 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content69% 
IMG OID642713199 
Product8-amino-7-oxononanoate synthase 
Protein accessionYP_001992297 
Protein GI192291692 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCAGA GCCTTGAAGC CGACCTGCGT TCACTTGCGG ATGCGGGGCG GCGACGCAAG 
CTCCAGCCGC GCGCCGGCGT CGACTTCACT TCCAATGATT ACCTCGGCCT CGCCGAGTCC 
GACGAGTTGC GCCAAGCCGC CGCCAATGCG GTTGCGCGCG GCGTGCCGAT CGGAGCCGGC 
GGCTCTCGGT TGCTGCGTGG TAATCATGAA GAGCACGAAG CGCTCGAAGC GGAAGCGGCT 
GATTACTTCG GCGCGGAAAG CGCGCTGTAT CTCGGCGGCG GCTTCAGCGC CAATCACGCG 
ATCTTCGCGA CGCTGCCGCA GCGTGGCGAT CTCGTACTGT ACGATGAGCT GATCCATGCA 
AGCGTGCACG AAGGCATGCG CCGCGGTCGC GCGACCTGCG AAAGCGTGCC CCACAGTGAT 
GTCGAGGCGT TCGACGCGCA GTTGCGGCAA TGGCGCGCCG GCGGTGGCCG TGGCCGCGCC 
TGGATCGCGG TGGAGAGCGT GTACAGCATG GACGGCGACA GCCCGCGGCT AAACGAGCTG 
GTCGCGGTGG CGGATCGGCA CGACGCCATT CTGGTGATCG ACGAGGCGCA CGCGACCGGC 
GTCGCCGGAC CGGAGGGGCG GGGACTGGCC GCTTCGTTTG AGGGCCGTGC CAACGTGATC 
ACGCTGCACA CCTGCGGCAA GGCGCTCGGC ACCATGGGCG GCTTTGTGCT CGGTCCGAAG 
ATCGTGCGCG ACTTCCTGGT CAACCGGGCG CGGCCGTTTA TCTTCGCCAC CGCGCCGTCG 
CCGCTGATTG CGGCGGTGAC GCGCGCGGCG CTCGACATCA GCCGCACCCG GCCGGAGCGA 
CGGGAGCGGC TCGCCTCGCT GGTCGCGTTC GCGGATCGCG AACTGAAGCA GCGTTGCGGC 
ATCACCTCGT CGGGCTCGCA CATCCTGCCG ATCATCGTCG GTGCCAACAG CACGGCGGTG 
GCGCTCGCGG CATCGCTGCA GCGGCGTGGC TTCGACGTTC GCGCGATCCG GCCACCGACG 
GTGCCCGAAG GCACCGCGCG GCTGCGCATC GCGCTCAGCG CCAATCTGTC CGAGGAGGTG 
ATCGCCTCGC TGTTCGCAGC GCTTGCCGAG GATATGAGGG CGGCGGCATG A
 
Protein sequence
MYQSLEADLR SLADAGRRRK LQPRAGVDFT SNDYLGLAES DELRQAAANA VARGVPIGAG 
GSRLLRGNHE EHEALEAEAA DYFGAESALY LGGGFSANHA IFATLPQRGD LVLYDELIHA 
SVHEGMRRGR ATCESVPHSD VEAFDAQLRQ WRAGGGRGRA WIAVESVYSM DGDSPRLNEL 
VAVADRHDAI LVIDEAHATG VAGPEGRGLA ASFEGRANVI TLHTCGKALG TMGGFVLGPK 
IVRDFLVNRA RPFIFATAPS PLIAAVTRAA LDISRTRPER RERLASLVAF ADRELKQRCG 
ITSSGSHILP IIVGANSTAV ALAASLQRRG FDVRAIRPPT VPEGTARLRI ALSANLSEEV 
IASLFAALAE DMRAAA