| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3309 |
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| Symbol | |
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| ID | 6410981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3565419 |
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| End bp | 3566057 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642713187 |
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| Product | Endopeptidase Clp |
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| Protein accession | YP_001992286 |
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| Protein GI | 192291681 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGATC CGGTGGAAAC CTACATGAAC CTCGTGCCGA TGGTGGTCGA ACAGACCAAC
CGCGGCGAAC GAGCCTACGA CATCTTCTCG CGCCTCCTGA AAGAGCGGAT TATCTTCGTC
ACCGGCCCGG TCGAAGACGG CATGTCGACG CTGATCGTCG CGCAGCTCCT GTTCCTTGAA
GCGGAAAATC CGAAGAAGGA AATTTCGATG TACATCAACT CGCCGGGCGG GGTGGTGACG
TCGGGTCTGG CGATCTACGA CACCATGCAG TTCATCCGCC CGCCGGTGTC GACGCTGTGC
ACCGGTCAGG CCGCGTCGAT GGGCTCGCTG CTGCTCGCTG CCGGCCACAA GGACATGCGG
TTCTCGCTGC CGAACGCGCG GATCATGGTG CATCAGCCGT CTGGTGGCTT CCAGGGCCAG
GCGACCGACA TCATGCTGCA CGCCCAGGAG ATTCTGAACC TGAAGAAGCG GCTCAACGAG
ATCTACGTGC ATCACACCGG TCAGACCTAC AAGGCGATCG AGGATGCGCT GGAGCGCGAC
AAGTTCCTGA CCGCCGAAAT GGCCCGGGAA TTCGGGATCG TCGACAAGGT GATCGAAAAG
CGCCCCGAAG ATCCCGCGCC GGCCCCGAAG GCTGCCTGA
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| Protein sequence | MRDPVETYMN LVPMVVEQTN RGERAYDIFS RLLKERIIFV TGPVEDGMST LIVAQLLFLE
AENPKKEISM YINSPGGVVT SGLAIYDTMQ FIRPPVSTLC TGQAASMGSL LLAAGHKDMR
FSLPNARIMV HQPSGGFQGQ ATDIMLHAQE ILNLKKRLNE IYVHHTGQTY KAIEDALERD
KFLTAEMARE FGIVDKVIEK RPEDPAPAPK AA
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