Gene Rpal_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3300 
Symbol 
ID6410970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3549731 
End bp3550096 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content55% 
IMG OID642713176 
ProductNADH dehydrogenase subunit A 
Protein accessionYP_001992277 
Protein GI192291672 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCA TTCTGTCTAA CTACCTGCCA ATCGTCGTTT TTATCATCGT TGCGGCTGGT 
TTGAGCTTCG TTTTGCTGGT CGCGCCGTTC GCGGTGGCGT ATCAGCAACC GGACCCGGAA
AAGCTCTCCG CCTATGAATG CGGATTCAAT GCTTTCAGCG ATGCCCGCAT GAAATTCGAC
GTCAGATTCT ACCTTGTCGC CATTCTGTTC ATCATCTTCG ACCTCGAAGT CGCATTCCTG
TTTCCGTGGG CGGTGGCCTT CGGCAAGCTC GGTGCGACCG GCTTCTGGTC GATGATGGTA
TTCCTTGGCG TCCTGACCGT CGGCTTCGCC TACGAATGGA AGAAGGGCGC TCTGGAATGG
GATTGA
 
Protein sequence
MSGILSNYLP IVVFIIVAAG LSFVLLVAPF AVAYQQPDPE KLSAYECGFN AFSDARMKFD 
VRFYLVAILF IIFDLEVAFL FPWAVAFGKL GATGFWSMMV FLGVLTVGFA YEWKKGALEW
D