| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3299 |
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| Symbol | |
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| ID | 6410969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3549123 |
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| End bp | 3549719 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713175 |
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| Product | NADH dehydrogenase subunit B |
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| Protein accession | YP_001992276 |
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| Protein GI | 192291671 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGCCGA CGCCGTCGCA ACATCCGGTC GGCGCGCAGC CGCTGATCGC GCGGCCCGCT
ACCGGCATCA TCGACCCCAA CACCGGCAGG CCGGTCGGGG CGGATGATCC GTTCTTTCTC
AACGTCAACC GCGAACTGTC CGACAAAGGC TTCTTCGTTG CTGCGACCGA TGACCTGATC
ACCTGGGCGC GCACCGGCTC GCTGATGTGG ATGACCTTCG GTCTCGCCTG CTGCGCCGTC
GAGATGATGC AGCTGTCGAT GCCGCGCTAC GACGCCGAGC GTTTCGGCTT CGCGCCGCGT
GCGTCGCCGC GTCAGTCCGA CGTGATGATC GTCGCCGGCA CGCTGACCAA CAAGATGGCC
CCGGCGCTGC GCAAGGTTTA CGACCAGATG CCGGAGCCGC GCTACGTGAT CTCGATGGGA
TCGTGTGCCA ACGGCGGCGG CTACTACCAC TATTCGTATT CCGTGGTGCG CGGCTGCGAC
CGCATCGTTC CGATCGACAT CTATGTGCCC GGCTGTCCGC CCACCGCCGA AGCGCTGCTG
TACGGCGTGA TGCTGCTGCA GAAGAAAATC CGGCGGACCG GCACTATCGA ACGCTGA
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| Protein sequence | MQPTPSQHPV GAQPLIARPA TGIIDPNTGR PVGADDPFFL NVNRELSDKG FFVAATDDLI
TWARTGSLMW MTFGLACCAV EMMQLSMPRY DAERFGFAPR ASPRQSDVMI VAGTLTNKMA
PALRKVYDQM PEPRYVISMG SCANGGGYYH YSYSVVRGCD RIVPIDIYVP GCPPTAEALL
YGVMLLQKKI RRTGTIER
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