| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3298 |
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| Symbol | |
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| ID | 6410968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3548495 |
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| End bp | 3549109 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642713174 |
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| Product | NADH dehydrogenase subunit C |
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| Protein accession | YP_001992275 |
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| Protein GI | 192291670 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGACA ACGGGCTCGA CACCCTGGGT CAGACGATCG TCGGCGCCTT GCCGGGCATC
GCGACCGGTC ACTCGGTCGG ATTCGGCCAG CTCACGCTGA CGGTCGATGC CGGCAAAATC
GTGGAGGTGA TGCGGCTGCT GCGCGACGAT CCGCGCTTCC GCTTCATCAG CTTCATCGAC
ATGACCGCGG TCGACTATCC GGGCCGCGCG GAACGGTTCG AGATCGTCTA TCACCTGCTT
TCGCCCAAGC TGAACGAGCG GGTGCGGGTG AAGGCCGAGG TCGGCGAGAC CACGCTGGTG
CCGTCGATCA TCGAGGTGTT TCCCGGTGCC GACTGGTTCG AGCGCGAAGC CTACGACCTC
TACGGCATCG TCATCACCGG TCATCCCGAT ATGCGCCGGC TGCTGACTGA TTATGGTTTC
GATGGTCATC CGCTGCGCAA GGATTTTCCG CTGACCGGTT TCGTCGAGGT TCGCTACGAC
GACGACCAGA AGCGGGTGAT CTACGAGCCG GTGCGGCTCA ATCAGGAGTT CCGTAAGTTC
GACTTCCTAT CGCCCTGGGA AGGGGCTGAC TATCCGGTCC TTCCCGGAGA CGAGAAGGCG
GGAGTGAAGT CGTGA
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| Protein sequence | MDDNGLDTLG QTIVGALPGI ATGHSVGFGQ LTLTVDAGKI VEVMRLLRDD PRFRFISFID
MTAVDYPGRA ERFEIVYHLL SPKLNERVRV KAEVGETTLV PSIIEVFPGA DWFEREAYDL
YGIVITGHPD MRRLLTDYGF DGHPLRKDFP LTGFVEVRYD DDQKRVIYEP VRLNQEFRKF
DFLSPWEGAD YPVLPGDEKA GVKS
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