| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3297 |
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| Symbol | |
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| ID | 6410967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3547235 |
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| End bp | 3548443 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713173 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_001992274 |
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| Protein GI | 192291669 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACG CTGCTGCTCC CGACGCTGCC AGCGTCCGCA ACTTCACCAT CAATTTCGGT
CCGCAGCATC CGGCGGCGCA CGGCGTGCTC CGGCTGGTGC TGGAGCTCGA CGGCGAGGTG
GTCGAGCGGG TCGATCCGCA TATCGGCCTC CTGCATCGCG GCACCGAGAA GCTGATCGAG
CAGAAGACCT ATCTGCAGGC GATTCCGTAT TTCGATCGGC TCGATTACGT CGCGCCGATG
AACCAGGAAC ACGCCTTCTG CCTGGCTGTG GAAAAGCTGC TCGGGATCGC GGTGCCGCGG
CGCGCCCAAC TGATCCGCGT TCTGTACGCC GAGATCGGCC GCATCCTGTC GCATCTGCTG
AACGTCACCA CGCAGGCGAT GGACGTCGGC GCGCTGACTC CGCCGCTGTG GGGCTTCGAA
GAGCGCGAAA AGCTGATGAT GTTCTACGAG CGCGCCTCCG GCAGCCGGAT GCACGCCGCG
TATTTCCGCG TCGGCGGCGT GCATCAGGAT CTGCCGCCGA AGCTGGTCGA CGACATCGAC
GCCTGGTGTG ACGCATTCCC GGCGGTGGTG AACGATCTCG ACCGTCTGCT CAGCGACAAC
CGCATCTTCA AGCAGCGCAA CGTCGATATC GGCGTGGTGA CGCTCGATCA GGCCTGGTCC
TGGGGCTTCT CCGGCGTGAT GGTGCGCGGC TCCGGCGCGG CCTGGGACCT GCGCAAGTCG
CAGCCCTACG AATGCTACGC CGAGCTCGAT TTCGAAGTGC CGATCGGCAA GAACGGTGAC
TGCTACGACC GCTACCACAT CCGCATGGAA GAGATGCGGC AGTCGGTTCG GATCATGAAG
CAGTGCATTG CCAAGCTGCG GGCGCCGGAC GGGCAGGGGC CGGTTGTGGT CGACGACCAC
AAGATCTTCC CGCCGCGCCG CGGCGAGATG AAGCGCTCGA TGGAAGCGCT GATCCATCAC
TTCAAGCTGT ACACCGAGGG CTTCCACGTC CCGGCCGGCG AAGTCTATGT CGCGGTCGAG
GCGCCGAAGG GCGAGTTCGG CGTGTACCTG GTGTCCGACG GCAGCAACAA GCCTTACAAG
TGCAAGATCC GTGCGCCGGG CTTCGCCCAT CTGCAGGCGA TGGACTTCCT CAGCCGCGGC
CATCTGCTCG CCGACGTCTC GGCGATTCTC GGTTCGCTCG ACATCGTGTT CGGAGAGGTC
GATCGGTGA
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| Protein sequence | MADAAAPDAA SVRNFTINFG PQHPAAHGVL RLVLELDGEV VERVDPHIGL LHRGTEKLIE
QKTYLQAIPY FDRLDYVAPM NQEHAFCLAV EKLLGIAVPR RAQLIRVLYA EIGRILSHLL
NVTTQAMDVG ALTPPLWGFE EREKLMMFYE RASGSRMHAA YFRVGGVHQD LPPKLVDDID
AWCDAFPAVV NDLDRLLSDN RIFKQRNVDI GVVTLDQAWS WGFSGVMVRG SGAAWDLRKS
QPYECYAELD FEVPIGKNGD CYDRYHIRME EMRQSVRIMK QCIAKLRAPD GQGPVVVDDH
KIFPPRRGEM KRSMEALIHH FKLYTEGFHV PAGEVYVAVE APKGEFGVYL VSDGSNKPYK
CKIRAPGFAH LQAMDFLSRG HLLADVSAIL GSLDIVFGEV DR
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