| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3293 |
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| Symbol | |
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| ID | 6410963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3543959 |
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| End bp | 3545284 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713169 |
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| Product | NADH dehydrogenase I subunit F |
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| Protein accession | YP_001992270 |
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| Protein GI | 192291665 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGACG ACAAGGACCG CATCTTCCGG AACCTGTACG GTCTCGACGA CTGGACGCTG
AAGGGCGCAC GCCGTCGCGG CGGGTGGGAA GGTACCAAGG CGATCATCGA CAAGGGCCGC
GACTGGATCA TCAACGAGAT GAAGGCGTCG GGCCTGCGCG GCCGCGGCGG CGCCGGCTTC
CCGACCGGCT TGAAGTGGTC CTTCATGCCG AAGGACAATG CCGACGGCCG GCCGAGCTAT
CTCGTCGTCA ATGCCGACGA GTCCGAACCC GGCACCTGCA AAGACCGCGA GATCATGCGC
CACGATCCGC ACACGCTGGT CGAAGGCTGT CTGCTCGCGG GCTGCGCGAT GGGCGCCCAC
ACCGGCTACA TCTACGTCCG CGGCGAGTTC ATCCGCGAGC GCGAGCGGCT GCAGGCGGCG
ATCGACCAGG CCTATGAGGC CAAGCTGATC GGCAAGGACA ACGTTCACGG CTATCCGTTC
GACCTCTACG TCGCTCACGG CGCCGGCGCC TACATCTGCG GTGAAGAAAC CGCGCTGCTC
GAAAGCCTCG AAGGCAAGAA GGGCCAGCCG CGGCTGAAGC CGCCGTTCCC GGCGAACGTC
GGTCTGTTCG GCTGCCCGAC CACGGTCAAC AACGTCGAGT CGATCGCGGT CGCCCCGGAC
ATCCTGCGCC GCGGCGCAGC GTGGTTCTCG TCGATCGGAC GCGCCAACAA CGTTGGTACC
AAGCTTTACG GCATCTCCGG CCACGTCAAC ACGCCCTGCG TCGTCGAAGA AGCGATGAGC
ATTCCGTTCC GCGAGCTGAT CGAGAAGCAC GGCGGCGGCA TTCGTGGCGG CTGGGACAAT
CTGCTGGCGA TCATTCCCGG CGGCGCGTCG TGCCCGCTGA TCCCGGCGGC GGATTGCGAA
GAGCTGATCA TGGACTTCGA CGGCACCCGC GCGGTGAAGT CGAGCTTCGG CACCGCCGGC
GTGATCGTGA TGGACAAGTC GACCGACGTC GTCGCCGCGA TCGCGCGCAT CAGCTACTTC
TTCAAGCACG AAAGCTGCGG CCAGTGCACG CCGTGCCGCG AAGGCACCGG CTGGATGTGG
CGCGTGCTCG ACCGCATGGT CGAAGGCCGC GCCCATAAGC GCGAAATCGA CATGCTGCTG
GAAGTGACCA AGCAGGTCGA AGGCCACACC ATCTGCGCGC TCGGCGATGC CGCGGCCTGG
CCGATCCAGG GCCTGATCCG CGCCTTCCGC CCCGAGATCG AGCGCCGCAT TGACGACTTC
TCGCGCAAGG CCACGCTCGA CGATCAGGGC GTGCTCGATC CGGCGCACAT GCAAGCGGCG
GAGTGA
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| Protein sequence | MLDDKDRIFR NLYGLDDWTL KGARRRGGWE GTKAIIDKGR DWIINEMKAS GLRGRGGAGF
PTGLKWSFMP KDNADGRPSY LVVNADESEP GTCKDREIMR HDPHTLVEGC LLAGCAMGAH
TGYIYVRGEF IRERERLQAA IDQAYEAKLI GKDNVHGYPF DLYVAHGAGA YICGEETALL
ESLEGKKGQP RLKPPFPANV GLFGCPTTVN NVESIAVAPD ILRRGAAWFS SIGRANNVGT
KLYGISGHVN TPCVVEEAMS IPFRELIEKH GGGIRGGWDN LLAIIPGGAS CPLIPAADCE
ELIMDFDGTR AVKSSFGTAG VIVMDKSTDV VAAIARISYF FKHESCGQCT PCREGTGWMW
RVLDRMVEGR AHKREIDMLL EVTKQVEGHT ICALGDAAAW PIQGLIRAFR PEIERRIDDF
SRKATLDDQG VLDPAHMQAA E
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