| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3290 |
|---|
| Symbol | |
|---|
| ID | 6410960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 3540347 |
|---|
| End bp | 3540835 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642713166 |
|---|
| Product | NADH dehydrogenase subunit I |
|---|
| Protein accession | YP_001992267 |
|---|
| Protein GI | 192291662 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.221287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCA CCGCTACTGC CCGTTCGCTG CTTCTGACCG AGTTCGTATC GGCGTTTTTC
CTCGCCATGC GTTACTTCTT CAAACCGAAG CCGACGATCA ATTATCCTTT CGAGAAGAAC
CCGATCTCAC CGCGGTTCCG CGGCGAGCAC GCGCTGCGCC GTTATCCCAA CGGTGAGGAA
CGCTGCATCG CCTGCAAGCT GTGCGAGGCG GTGTGCCCCG CGCAGGCGAT CACCATCGAG
GCCGGCCCGC GCCGCAACGA CGGCACCCGC CGCACGGTGC GCTACGACAT CGACATGGTG
AAGTGCATCT ATTGTGGGTT CTGCCAGGAG GCGTGCCCGG TCGACGCGAT CGTCGAGGGC
CCGAACTTCG AGTTCGCCAC CGAGACCCGC GAGGAATTGT ACTACGACAA GGCCCGCCTG
CTGGCCAACG GCGACCGCTG GGAACGCGAA ATCGCCAAGG CCATCTCCCT CGACGCGCCG
TACCGGTGA
|
|---|
| Protein sequence | MNVTATARSL LLTEFVSAFF LAMRYFFKPK PTINYPFEKN PISPRFRGEH ALRRYPNGEE
RCIACKLCEA VCPAQAITIE AGPRRNDGTR RTVRYDIDMV KCIYCGFCQE ACPVDAIVEG
PNFEFATETR EELYYDKARL LANGDRWERE IAKAISLDAP YR
|
|---|
| |