| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3285 |
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| Symbol | |
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| ID | 6410955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3534261 |
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| End bp | 3535700 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642713161 |
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| Product | NADH dehydrogenase subunit N |
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| Protein accession | YP_001992262 |
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| Protein GI | 192291657 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
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| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.917903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTTG AAACAGCCGG TTACCCGCTG CTTCCGATCC TGCCGGAACT GGTTCTGGTG
GTAGGGGCGA TGCTGCTCCT GATGCTCGGC GCGTATCGCG GGCCGAAGGC CACCGGCACC
GTCACGGTGC TGGCGATCCT GCTGCTGCTC GCCACCGGCG CGCTGGAGCT GTTCGCGCTG
CCGGGCGGCA AGCTGGTCAC CTTCGGCGGC AGCTTCATCG TCGACGACTT CGCCCGCTTC
CTGAAGGTGC TGGCGCTGAT CGGCTCGGCC GTGACGCTGA TCCTATCGCT CGAAGTGCTG
ACCGACCCTT CGCGCCGGAT GTTTGAATAC GCCATCCTGG TGCTGCTGTC GTCCGCCGGC
ATGCTGTTGC TGATCTCGGC CGGCGACCTG ATCATGCTGT ATCTCGGCCT CGAACTGATG
AGCCTTGCGC TCTACGTGGT CGCGGCCAGC AACCGTCAGG ATGCCAAGTC GAACGAAGCC
GGCATGAAGT ACTTCGTGCT CGGCGCGCTG TCGTCCGGCA TGCTGCTGTA CGGCGCCTCG
CTGATCTACG GCTTCACCGG CACGGTGCAG TTCTCGGGCA TTGCCGCTGC GGCCAAGGAC
GGCAATGTCG GCCTGGTGTT CGGCCTGGTG TTCCTGCTCG CCGGCCTGTG CTTCAAGGTC
TCGGCGGTGC CGTTCCACAT GTGGACGCCG GACGTCTACG AAGGCGCGCC GACCCCGGTC
ACCGCGTTCT TCGCTTCGGC GCCGAAGGTG GCGGGCATCG CGATCTTCAC CCGCGTCACG
CTGACCGCTT TCCCGAGCAT TGCGCCGCAG TGGCAGCAGA TCGTGATCTT CGTGGCGATC
GCCTCGATGG CGCTCGGCTC GTTCGCGGCG ATCGGCCAGA AAAACATCAA GCGCCTGATG
GCGTATTCGG CGATCGCCAA TATCGGCTTC GCGCTGGTCG GTCTGTCGGC CGGCACGGTC
GAAGGCGCGC AGGGCGTGAT CATCTACATC TCGATCTATG TCGCGATGAC CCTCGGCGCG
TTCGCGGTGA TTCTGGCGAT GCGTCGCAAC GGCATGCACG TCGAGAACAT CAGCGACTTT
GCCGGCCTGT CGCGCACCAA TCCGCCGCTG GCGTTCTTCT TCGCCATGCT GTTGTTCTCG
TTCGCAGGCA TTCCGCCGCT GGCCGGCTTC TTCGCCAAGT TCTACGTGTT CATGGCCGCG
ATCAAGGCCG GCATGTTCGT GCTGGCGGTG ATCGGCGTCG TCACCAGCGT GGTGGGCGCC
TACTACTATC TGGCCATCGT CAAGGTGATG TACTTCGACG AGCCGGCCCC GGGTGTCGAT
CCGGTGCGGC CGGAGCTGCG CGGCGTCCTG ATGGTCGCCG GTCTGTTCAA CATGCTGTTC
TTCGTTTACC CGGCGCCGCT GGTGAACGCA GCAACAGCGG CAGCCAAGTC GCTGTTCTGA
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| Protein sequence | MNFETAGYPL LPILPELVLV VGAMLLLMLG AYRGPKATGT VTVLAILLLL ATGALELFAL
PGGKLVTFGG SFIVDDFARF LKVLALIGSA VTLILSLEVL TDPSRRMFEY AILVLLSSAG
MLLLISAGDL IMLYLGLELM SLALYVVAAS NRQDAKSNEA GMKYFVLGAL SSGMLLYGAS
LIYGFTGTVQ FSGIAAAAKD GNVGLVFGLV FLLAGLCFKV SAVPFHMWTP DVYEGAPTPV
TAFFASAPKV AGIAIFTRVT LTAFPSIAPQ WQQIVIFVAI ASMALGSFAA IGQKNIKRLM
AYSAIANIGF ALVGLSAGTV EGAQGVIIYI SIYVAMTLGA FAVILAMRRN GMHVENISDF
AGLSRTNPPL AFFFAMLLFS FAGIPPLAGF FAKFYVFMAA IKAGMFVLAV IGVVTSVVGA
YYYLAIVKVM YFDEPAPGVD PVRPELRGVL MVAGLFNMLF FVYPAPLVNA ATAAAKSLF
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