Gene Rpal_3278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3278 
Symbol 
ID6410948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3528832 
End bp3529362 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content67% 
IMG OID642713154 
Productnuclear export factor GLE1 
Protein accessionYP_001992255 
Protein GI192291650 
COG category[S] Function unknown 
COG ID[COG4549] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATACGGC TGCGATCCGT ATCGGCAGCG GCGGCCCTTG CGGCCGCCGC GCTCGGCGCC 
GCGCCGGCGC TGGCCCACGT CACGTTGCAG CCGAACGAGG CGGTGGCCGG CAATTACTTC
CAAGCGGCAC TCAGCGTGCC GCACGGCTGC GACGGCACCG CGACAGTCGC GGTGCGGGTC
AAGATTCCGG ACGGCGTGCT GTCGGTGAAG CCGCAGATGA AGCCGGGCTG GTCGGTCGAG
ATCAAGACCC GCAAGATCGA AGGCGAACAG CCGAAGCTGC ACGGCAAGAC CGTCACCGAA
ACGGTCGACG AGGTGACCTG GCGCGGCGGT CCGCTCCCGG ACAACCTCTA CGACACCTTC
GGCCTGGTAA TGAAACTGCC TGATGCCGCC GGCAAGACGC TGTACTTCCC GGTGGTGCAG
GAATGCGAGA AGGGAGTTTC GCGCTGGATC GAAATTCCTG CTGCGGGACA GAAGTCCGAC
GCCCTGCATG AGCCGGCCCC GGCGCTGCGG CTGAAGCCGA AGGCGCCGTG A
 
Protein sequence
MIRLRSVSAA AALAAAALGA APALAHVTLQ PNEAVAGNYF QAALSVPHGC DGTATVAVRV 
KIPDGVLSVK PQMKPGWSVE IKTRKIEGEQ PKLHGKTVTE TVDEVTWRGG PLPDNLYDTF
GLVMKLPDAA GKTLYFPVVQ ECEKGVSRWI EIPAAGQKSD ALHEPAPALR LKPKAP