Gene Rpal_3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3263 
Symbol 
ID6410933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3510760 
End bp3511608 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content67% 
IMG OID642713139 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_001992240 
Protein GI192291635 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCAGG ACAAGGCGGC GCCGGCGCCG GCGGCCGAGC AGGGGTCCCG GAATCTGATT 
TTGCGAATCG CAGCTGCGCT GGTGCTGGCG CCGGGCGCGA TCGCGATCGC TTATCTCGGC
GGCTGGCCCT GGGCGGTGCT CGCGACCGCC GTGGCGGTCG GCCTGCTGCT GGAATGGCTG
AGCATCGTCG GCCTCGGCCG TGACTGGCCG ATCATCGGGG TCGGCGGACT CGGTCTGGTC
GTCTGCGGTG CAGCGCTGGG TGCTGGTGAG CCGTGGCTGG CCGCCGCCGC GATCGTGCTT
GCGCTTGCCG TTTTGGCGCT GCTTGGCGGC GGGCAGCGCC GTTGGGCGAC GTCTGGCTTT
GGCTACGCCG TGGCTGCCCT GGTCGCCTCG ATCCTGATCC GCGCCGATCC GGACTATGGC
TTCGCCGCCT TGATGCTGAT CCTGTTGATC GTCTGGGTCA CCGATATCGG CGGCTATTTC
GCCGGTCGCG GGATCGGCGG GCCGAAGCTG TGGCCGCGGG TCAGCCCGAA AAAGACCTGG
GCGGGCGCAA TCGGCGGCTT CGCGCTGAGC CTGGTGATCG CGGCTGGCTT TGCGTTGTTC
GGTCTTGGAA AAATGCTGCC GCTGCTGGTG CTTGCAGCGA TCCTTTCAAC TGTTTCTCAG
CTCGGTGATC TGTTCGAATC CGCGGTCAAG CGCCGGTTCG GCGTAAAGGA CTCAAGCCAC
ATCATTCCCG GCCATGGCGG GTTGATGGAT CGGCTTGATG GCTATGTGGC GGCGGTCGTG
GTGGCGGTAT TGATCGGGCT GACGCGCGGA CCGCTGGATG GTATTGGCCG CGGATTGATG
GTGTGGTGA
 
Protein sequence
MSQDKAAPAP AAEQGSRNLI LRIAAALVLA PGAIAIAYLG GWPWAVLATA VAVGLLLEWL 
SIVGLGRDWP IIGVGGLGLV VCGAALGAGE PWLAAAAIVL ALAVLALLGG GQRRWATSGF
GYAVAALVAS ILIRADPDYG FAALMLILLI VWVTDIGGYF AGRGIGGPKL WPRVSPKKTW
AGAIGGFALS LVIAAGFALF GLGKMLPLLV LAAILSTVSQ LGDLFESAVK RRFGVKDSSH
IIPGHGGLMD RLDGYVAAVV VAVLIGLTRG PLDGIGRGLM VW