Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3263 |
Symbol | |
ID | 6410933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3510760 |
End bp | 3511608 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642713139 |
Product | phosphatidate cytidylyltransferase |
Protein accession | YP_001992240 |
Protein GI | 192291635 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCAGG ACAAGGCGGC GCCGGCGCCG GCGGCCGAGC AGGGGTCCCG GAATCTGATT TTGCGAATCG CAGCTGCGCT GGTGCTGGCG CCGGGCGCGA TCGCGATCGC TTATCTCGGC GGCTGGCCCT GGGCGGTGCT CGCGACCGCC GTGGCGGTCG GCCTGCTGCT GGAATGGCTG AGCATCGTCG GCCTCGGCCG TGACTGGCCG ATCATCGGGG TCGGCGGACT CGGTCTGGTC GTCTGCGGTG CAGCGCTGGG TGCTGGTGAG CCGTGGCTGG CCGCCGCCGC GATCGTGCTT GCGCTTGCCG TTTTGGCGCT GCTTGGCGGC GGGCAGCGCC GTTGGGCGAC GTCTGGCTTT GGCTACGCCG TGGCTGCCCT GGTCGCCTCG ATCCTGATCC GCGCCGATCC GGACTATGGC TTCGCCGCCT TGATGCTGAT CCTGTTGATC GTCTGGGTCA CCGATATCGG CGGCTATTTC GCCGGTCGCG GGATCGGCGG GCCGAAGCTG TGGCCGCGGG TCAGCCCGAA AAAGACCTGG GCGGGCGCAA TCGGCGGCTT CGCGCTGAGC CTGGTGATCG CGGCTGGCTT TGCGTTGTTC GGTCTTGGAA AAATGCTGCC GCTGCTGGTG CTTGCAGCGA TCCTTTCAAC TGTTTCTCAG CTCGGTGATC TGTTCGAATC CGCGGTCAAG CGCCGGTTCG GCGTAAAGGA CTCAAGCCAC ATCATTCCCG GCCATGGCGG GTTGATGGAT CGGCTTGATG GCTATGTGGC GGCGGTCGTG GTGGCGGTAT TGATCGGGCT GACGCGCGGA CCGCTGGATG GTATTGGCCG CGGATTGATG GTGTGGTGA
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Protein sequence | MSQDKAAPAP AAEQGSRNLI LRIAAALVLA PGAIAIAYLG GWPWAVLATA VAVGLLLEWL SIVGLGRDWP IIGVGGLGLV VCGAALGAGE PWLAAAAIVL ALAVLALLGG GQRRWATSGF GYAVAALVAS ILIRADPDYG FAALMLILLI VWVTDIGGYF AGRGIGGPKL WPRVSPKKTW AGAIGGFALS LVIAAGFALF GLGKMLPLLV LAAILSTVSQ LGDLFESAVK RRFGVKDSSH IIPGHGGLMD RLDGYVAAVV VAVLIGLTRG PLDGIGRGLM VW
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